This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4rkn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:01, 2 March 2023) (edit) (undo)
 
Line 1: Line 1:
==Wolinella succinogenes octaheme sulfite reductase MccA, form II==
==Wolinella succinogenes octaheme sulfite reductase MccA, form II==
-
<StructureSection load='4rkn' size='340' side='right' caption='[[4rkn]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+
<StructureSection load='4rkn' size='340' side='right'caption='[[4rkn]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4rkn]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_succinogenes Vibrio succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RKN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RKN FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4rkn]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Wolinella_succinogenes_DSM_1740 Wolinella succinogenes DSM 1740]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RKN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RKN FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=DTN:DITHIONITE'>DTN</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO3:SULFITE+ION'>SO3</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=DTN:DITHIONITE'>DTN</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO3:SULFITE+ION'>SO3</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4rkm|4rkm]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rkn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rkn OCA], [https://pdbe.org/4rkn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rkn RCSB], [https://www.ebi.ac.uk/pdbsum/4rkn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rkn ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mcca, WS0379 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273121 Vibrio succinogenes])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rkn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rkn OCA], [http://pdbe.org/4rkn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rkn RCSB], [http://www.ebi.ac.uk/pdbsum/4rkn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rkn ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MCCA_WOLSU MCCA_WOLSU] Respiratory sulfite reductase that catalyzes the reduction of sulfite to sulfide in a single step, consuming six electrons in the process (PubMed:22040142, PubMed:25642962). Required for sulfite respiration under anaerobic growth conditions (PubMed:22040142). Has only marginal activity with nitrite.<ref>PMID:22040142</ref> <ref>PMID:25642962</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Vibrio succinogenes]]
+
[[Category: Large Structures]]
-
[[Category: Einsle, O]]
+
[[Category: Wolinella succinogenes DSM 1740]]
-
[[Category: Hermann, B]]
+
[[Category: Einsle O]]
-
[[Category: Kern, M]]
+
[[Category: Hermann B]]
-
[[Category: Pietra, L La]]
+
[[Category: Kern M]]
-
[[Category: Simon, J]]
+
[[Category: La Pietra L]]
-
[[Category: Multiheme cytochrome c]]
+
[[Category: Simon J]]
-
[[Category: Periplasmic]]
+
-
[[Category: Sulfite reductase]]
+
-
[[Category: Unknown function]]
+

Current revision

Wolinella succinogenes octaheme sulfite reductase MccA, form II

PDB ID 4rkn

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools