4zwp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of organophosphate anhydrolase/prolidase mutant Y212F==
==Crystal structure of organophosphate anhydrolase/prolidase mutant Y212F==
-
<StructureSection load='4zwp' size='340' side='right' caption='[[4zwp]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+
<StructureSection load='4zwp' size='340' side='right'caption='[[4zwp]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4zwp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Altsx Altsx]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZWP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ZWP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4zwp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Alteromonas_sp. Alteromonas sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZWP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ZWP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BA:BARIUM+ION'>BA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=M44:N,N-BIS(1-METHYLETHYL)PHOSPHORODIAMIDIC+ACID'>M44</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BA:BARIUM+ION'>BA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=M44:N,N-BIS(1-METHYLETHYL)PHOSPHORODIAMIDIC+ACID'>M44</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4zwu|4zwu]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4zwp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zwp OCA], [https://pdbe.org/4zwp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4zwp RCSB], [https://www.ebi.ac.uk/pdbsum/4zwp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4zwp ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pepQ, opaA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=232 ALTSX])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Xaa-Pro_dipeptidase Xaa-Pro dipeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.13.9 3.4.13.9] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4zwp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zwp OCA], [http://pdbe.org/4zwp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4zwp RCSB], [http://www.ebi.ac.uk/pdbsum/4zwp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4zwp ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PEPQ_ALTSX PEPQ_ALTSX]] Splits dipeptides with a prolyl or hydroxyprolyl residue in the C-terminal position and a nonpolar amino acid at the N-terminal position. Also catalyzes the hydrolysis of toxic organophosphorus cholinesterase-inhibiting compounds including insecticide paraoxon and nerve gases such as diisopropylfluorophosphate (DFP), O-isopropyl methylphosphonofluoridate (sarin), O-pinacolyl methylphosphonofluoridate (soman), and O-cyclohexyl methylphosphonofluoridate.<ref>PMID:8633861</ref> <ref>PMID:2001997</ref> <ref>PMID:9079288</ref> <ref>PMID:10866401</ref>
+
[https://www.uniprot.org/uniprot/PEPQ_ALTSX PEPQ_ALTSX] Splits dipeptides with a prolyl or hydroxyprolyl residue in the C-terminal position and a nonpolar amino acid at the N-terminal position. Also catalyzes the hydrolysis of toxic organophosphorus cholinesterase-inhibiting compounds including insecticide paraoxon and nerve gases such as diisopropylfluorophosphate (DFP), O-isopropyl methylphosphonofluoridate (sarin), O-pinacolyl methylphosphonofluoridate (soman), and O-cyclohexyl methylphosphonofluoridate.<ref>PMID:8633861</ref> <ref>PMID:2001997</ref> <ref>PMID:9079288</ref> <ref>PMID:10866401</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Altsx]]
+
[[Category: Alteromonas sp]]
-
[[Category: Xaa-Pro dipeptidase]]
+
[[Category: Large Structures]]
-
[[Category: Daczkowski, C M]]
+
[[Category: Daczkowski CM]]
-
[[Category: Harvey, S P]]
+
[[Category: Harvey SP]]
-
[[Category: Pegan, S D]]
+
[[Category: Pegan SD]]
-
[[Category: Hydrolase]]
+
-
[[Category: Opaa organophosphate prolidase anhydrolase]]
+

Revision as of 07:44, 18 May 2023

Crystal structure of organophosphate anhydrolase/prolidase mutant Y212F

PDB ID 4zwp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools