This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5o70

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:10, 29 November 2023) (edit) (undo)
 
Line 1: Line 1:
==Structure of the inactive T.maritima PDE (TM1595) D80N D154N mutant with reaction products 2 AMP==
==Structure of the inactive T.maritima PDE (TM1595) D80N D154N mutant with reaction products 2 AMP==
-
<StructureSection load='5o70' size='340' side='right' caption='[[5o70]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
+
<StructureSection load='5o70' size='340' side='right'caption='[[5o70]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5o70]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thema Thema]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O70 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5O70 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5o70]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima_MSB8 Thermotoga maritima MSB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O70 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5O70 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5o25|5o25]], [[5o4z|5o4z]], [[5o58|5o58]], [[5o1u|5o1u]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM_1595 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243274 THEMA])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5o70 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o70 OCA], [https://pdbe.org/5o70 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5o70 RCSB], [https://www.ebi.ac.uk/pdbsum/5o70 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5o70 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5o70 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o70 OCA], [http://pdbe.org/5o70 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5o70 RCSB], [http://www.ebi.ac.uk/pdbsum/5o70 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5o70 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9X1T1_THEMA Q9X1T1_THEMA]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 5o70" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5o70" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Phosphodiesterase 3D structures|Phosphodiesterase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Thema]]
+
[[Category: Large Structures]]
-
[[Category: Drexler, D]]
+
[[Category: Thermotoga maritima MSB8]]
-
[[Category: Witte, G]]
+
[[Category: Drexler D]]
-
[[Category: Hydrolase]]
+
[[Category: Witte G]]
-
[[Category: Phosphodiesterase]]
+

Current revision

Structure of the inactive T.maritima PDE (TM1595) D80N D154N mutant with reaction products 2 AMP

PDB ID 5o70

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5o70"
Personal tools