This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5no9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:15, 15 November 2023) (edit) (undo)
 
Line 1: Line 1:
==NLPPya in complex with mannosamine==
==NLPPya in complex with mannosamine==
-
<StructureSection load='5no9' size='340' side='right' caption='[[5no9]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
+
<StructureSection load='5no9' size='340' side='right'caption='[[5no9]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5no9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Cbs_118.80 Cbs 118.80]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NO9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NO9 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5no9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pythium_aphanidermatum Pythium aphanidermatum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NO9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5NO9 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=95Z:alpha-D-Mannosamine'>95Z</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5nnw|5nnw]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=95Z:2-amino-2-deoxy-alpha-D-mannopyranose'>95Z</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SD21-1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=65070 CBS 118.80])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5no9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5no9 OCA], [https://pdbe.org/5no9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5no9 RCSB], [https://www.ebi.ac.uk/pdbsum/5no9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5no9 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5no9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5no9 OCA], [http://pdbe.org/5no9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5no9 RCSB], [http://www.ebi.ac.uk/pdbsum/5no9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5no9 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9SPD4_9STRA Q9SPD4_9STRA]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Cbs 118 80]]
+
[[Category: Large Structures]]
-
[[Category: Anderluh, G]]
+
[[Category: Pythium aphanidermatum]]
-
[[Category: Lenarcic, T]]
+
[[Category: Anderluh G]]
-
[[Category: Podobnik, M]]
+
[[Category: Lenarcic T]]
-
[[Category: Actinoporin-like protein]]
+
[[Category: Podobnik M]]
-
[[Category: Complex with hexose]]
+
-
[[Category: Nep1-like protein]]
+
-
[[Category: Toxin]]
+

Current revision

NLPPya in complex with mannosamine

PDB ID 5no9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools