This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5mir

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:45, 1 November 2023) (edit) (undo)
 
Line 1: Line 1:
==Crystal Structure of Lactococcus lactis Thioredoxin Reductase Exposed to Visible Light (120 min)==
==Crystal Structure of Lactococcus lactis Thioredoxin Reductase Exposed to Visible Light (120 min)==
-
<StructureSection load='5mir' size='340' side='right' caption='[[5mir]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='5mir' size='340' side='right'caption='[[5mir]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5mir]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"streptococcus_hollandicus"_scholl_1891 "streptococcus hollandicus" scholl 1891]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MIR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MIR FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5mir]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_cremoris Lactococcus cremoris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MIR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MIR FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">N41_1746, NCDO763_0431 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1359 "Streptococcus hollandicus" Scholl 1891])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Thioredoxin-disulfide_reductase Thioredoxin-disulfide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.1.9 1.8.1.9] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5mir FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mir OCA], [https://pdbe.org/5mir PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5mir RCSB], [https://www.ebi.ac.uk/pdbsum/5mir PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5mir ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5mir FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mir OCA], [http://pdbe.org/5mir PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mir RCSB], [http://www.ebi.ac.uk/pdbsum/5mir PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mir ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A2RLJ5_LACLM A2RLJ5_LACLM]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 5mir" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5mir" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Thioredoxin reductase 3D structures|Thioredoxin reductase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Streptococcus hollandicus scholl 1891]]
+
[[Category: Lactococcus cremoris]]
-
[[Category: Thioredoxin-disulfide reductase]]
+
[[Category: Large Structures]]
-
[[Category: Bang, M B]]
+
[[Category: Bang MB]]
-
[[Category: Hagglund, P]]
+
[[Category: Hagglund P]]
-
[[Category: Harris, P]]
+
[[Category: Harris P]]
-
[[Category: Skjoldager, N]]
+
[[Category: Skjoldager N]]
-
[[Category: Svensson, B]]
+
[[Category: Svensson B]]
-
[[Category: Fad si-face open space]]
+
-
[[Category: Fad-nadp+ complex]]
+
-
[[Category: Fo-fr conformation]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Oxygen pocket]]
+
-
[[Category: Photosensitivity]]
+
-
[[Category: Reactive oxygen species]]
+
-
[[Category: Thioredoxin reductase]]
+

Current revision

Crystal Structure of Lactococcus lactis Thioredoxin Reductase Exposed to Visible Light (120 min)

PDB ID 5mir

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5mir"
Personal tools