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2p3e
From Proteopedia
(Difference between revisions)
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==Crystal structure of AQ1208 from Aquifex aeolicus== | ==Crystal structure of AQ1208 from Aquifex aeolicus== | ||
| - | <StructureSection load='2p3e' size='340' side='right' caption='[[2p3e]], [[Resolution|resolution]] 1.99Å' scene=''> | + | <StructureSection load='2p3e' size='340' side='right'caption='[[2p3e]], [[Resolution|resolution]] 1.99Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2p3e]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2p3e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P3E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P3E FirstGlance]. <br> |
| - | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1twi|1twi]]</td></tr> | + | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1twi|1twi]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lysA, aq_1208 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lysA, aq_1208 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Diaminopimelate_decarboxylase Diaminopimelate decarboxylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.20 4.1.1.20] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p3e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p3e OCA], [https://pdbe.org/2p3e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p3e RCSB], [https://www.ebi.ac.uk/pdbsum/2p3e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p3e ProSAT], [https://www.topsan.org/Proteins/RSGI/2p3e TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/DCDA_AQUAE DCDA_AQUAE]] Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine (By similarity).[HAMAP-Rule:MF_02120] |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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[[Category: Aquae]] | [[Category: Aquae]] | ||
[[Category: Diaminopimelate decarboxylase]] | [[Category: Diaminopimelate decarboxylase]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Chen, L]] | [[Category: Chen, L]] | ||
[[Category: Ebihara, A]] | [[Category: Ebihara, A]] | ||
Revision as of 15:15, 17 June 2021
Crystal structure of AQ1208 from Aquifex aeolicus
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Categories: Aquae | Diaminopimelate decarboxylase | Large Structures | Chen, L | Ebihara, A | Fu, Z Q | II, J T.Swindell | Kuramitsu, S | Structural genomic | Rose, J P | Shinkai, A | Wang, B C | Yokoyama, S | Zhu, J | Aq1208 | Aquifex aeolicus | Department of biological sciences osaka university | Department of biophysics and biochemistry university of tokyo | Lyase | PSI, Protein structure initiative | Riken genomic sciences center | Riken spring-8 center | Rsgi | Secsg
