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Arabinanase
From Proteopedia
(Difference between revisions)
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*<scene name='45/451702/Cv/7'>Arabinohexose binding pocket</scene>. | *<scene name='45/451702/Cv/7'>Arabinohexose binding pocket</scene>. | ||
*<scene name='45/451702/Cv/6'>Cl coordination site</scene>. | *<scene name='45/451702/Cv/6'>Cl coordination site</scene>. | ||
| + | |||
| + | == 3D Structures of Arabinanase == | ||
| + | [[Arabinanase 3D structures]] | ||
</StructureSection> | </StructureSection> | ||
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**[[4kc7]], [[4kc8]] - TpEndo-Ara – ''Thermotoga petrophila''<br /> | **[[4kc7]], [[4kc8]] - TpEndo-Ara – ''Thermotoga petrophila''<br /> | ||
**[[4kca]], [[4kcb]] - Endo-Ara – bovine<br /> | **[[4kca]], [[4kcb]] - Endo-Ara – bovine<br /> | ||
| + | **[[6b7k]] - Endo-Ara – ''Bacillus licheniformis''<br /> | ||
*Endo-arabinanase complex with substrate | *Endo-arabinanase complex with substrate | ||
| - | **[[1gye]] - CcEndo-Ara (mutant) + | + | **[[1gye]] - CcEndo-Ara (mutant) + arabinohexaose<br /> |
**[[3d5z]], [[3d61]] - GsEndo-Ara (mutant) + arabinotriose<br /> | **[[3d5z]], [[3d61]] - GsEndo-Ara (mutant) + arabinotriose<br /> | ||
**[[5ho9]] - GsEndo-Ara + arabinooctaose<br /> | **[[5ho9]] - GsEndo-Ara + arabinooctaose<br /> | ||
| - | **[[5hof]] - GsEndo-Ara + | + | **[[5hof]], [[6f1g]] - GsEndo-Ara + arabinopentaose<br /> |
**[[5hon]] - GsEndo-Ara + arabinotriose<br /> | **[[5hon]] - GsEndo-Ara + arabinotriose<br /> | ||
**[[2x8s]] - BsEndo-Ara (mutant) + arabinotriose<br /> | **[[2x8s]] - BsEndo-Ara (mutant) + arabinotriose<br /> | ||
| + | **[[6a8h]] - GtEndo-Ara (mutant) + arabinotriose – ''Geobacillus thermodenitrificans''<br /> | ||
| + | **[[6a8i]] - GtEndo-Ara (mutant) + arabinohexaose <br /> | ||
*Exo-arabinanase | *Exo-arabinanase | ||
Revision as of 11:11, 19 March 2019
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3D Structures of Arabinanase
Updated on 19-March-2019
References
- ↑ Alhassid A, Ben-David A, Tabachnikov O, Libster D, Naveh E, Zolotnitsky G, Shoham Y, Shoham G. Crystal structure of an inverting GH 43 1,5-alpha-L-arabinanase from Geobacillus stearothermophilus complexed with its substrate. Biochem J. 2009 Jul 29;422(1):73-82. PMID:19505290 doi:10.1042/BJ20090180
- ↑ Nurizzo D, Turkenburg JP, Charnock SJ, Roberts SM, Dodson EJ, McKie VA, Taylor EJ, Gilbert HJ, Davies GJ. Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade beta-propeller fold. Nat Struct Biol. 2002 Sep;9(9):665-8. PMID:12198486 doi:10.1038/nsb835
