4qdl
From Proteopedia
(Difference between revisions)
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==Crystal structure of E.coli Cas1-Cas2 complex== | ==Crystal structure of E.coli Cas1-Cas2 complex== | ||
| - | <StructureSection load='4qdl' size='340' side='right' caption='[[4qdl]], [[Resolution|resolution]] 2.70Å' scene=''> | + | <StructureSection load='4qdl' size='340' side='right'caption='[[4qdl]], [[Resolution|resolution]] 2.70Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4qdl]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4qdl]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QDL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QDL FirstGlance]. <br> |
| - | </td></tr> | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4qdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qdl OCA], [https://pdbe.org/4qdl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4qdl RCSB], [https://www.ebi.ac.uk/pdbsum/4qdl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4qdl ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/CAS1_ECOLI CAS1_ECOLI] CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Cas1 is thought to be involved in CRISPR adaptation, the first stage of CRISPR immunity. Might be involved in the addition/removal of CRISPR spacers. Endonucleolytically cleaves linear ssRNA, ssDNA and short (34 base) dsDNA as well as branched DNA substrates such as Holliday junctions, replication forks and 5'-flap DNA substrates. Genetic interactions suggest Cas1 interacts with components of the RecBC and RuvB DNA repair systems.<ref>PMID:21255106</ref> |
==See Also== | ==See Also== | ||
| - | *[[Endonuclease|Endonuclease]] | + | *[[Endonuclease 3D structures|Endonuclease 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Escherichia coli K-12]] |
| - | [[Category: Gasiunas | + | [[Category: Large Structures]] |
| - | [[Category: Grazulis | + | [[Category: Gasiunas G]] |
| - | [[Category: Siksnys | + | [[Category: Grazulis S]] |
| - | [[Category: Silanskas | + | [[Category: Siksnys V]] |
| - | [[Category: Sinkunas | + | [[Category: Silanskas A]] |
| - | [[Category: Tamulaitiene | + | [[Category: Sinkunas T]] |
| - | + | [[Category: Tamulaitiene G]] | |
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Revision as of 11:24, 15 February 2023
Crystal structure of E.coli Cas1-Cas2 complex
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