5y8j
From Proteopedia
(Difference between revisions)
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- | '''Unreleased structure''' | ||
- | + | ==Mycobacterium tuberculosis 3-Hydroxyisobutyrate dehydrogenase (MtHIBADH) + (R)-3-hydroxyisobutyrate (R-HIBA)== | |
+ | <StructureSection load='5y8j' size='340' side='right' caption='[[5y8j]], [[Resolution|resolution]] 1.86Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[5y8j]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y8J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5Y8J FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=9ON:(2~{S})-2-methylpentanedioic+acid'>9ON</scene>, <scene name='pdbligand=AKR:ACRYLIC+ACID'>AKR</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HIU:(2R)-3-HYDROXY-2-METHYLPROPANOIC+ACID'>HIU</scene></td></tr> | ||
+ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-hydroxyisobutyrate_dehydrogenase 3-hydroxyisobutyrate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.31 1.1.1.31] </span></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5y8j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y8j OCA], [http://pdbe.org/5y8j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5y8j RCSB], [http://www.ebi.ac.uk/pdbsum/5y8j PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5y8j ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Biochemical and crystallographic studies on Mycobacterium tuberculosis 3-hydroxyisobutyric acid dehydrogenase ( Mt HIBADH), a member of the 3-hydroxyacid dehydrogenase superfamily, have been carried out. Gel filtration and blue native PAGE of Mt HIBADH show that the enzyme is a dimer. The enzyme preferentially uses NAD(+) as the cofactor and is specific to S- hydroxyisobutyric acid (HIBA). It can also use R- HIBA, L- serine and 3- hydroxypropanoic acid (3-HP) as substrates, but with much less efficiency. The pH optimum for activity is around 11. Structures of the native enzyme, the holoenzyme, binary complexes with NAD(+), S-HIBA, R-HIBA, L-serine and 3-HP and ternary complexes involving the substrates and NAD(+), have been determined. None of the already known structures of HIBADH contain a substrate molecule at the binding site. The structures reported here, provide for the first time, among other things, a clear indication of the location and interactions of the substrates at the active site. They also define the entrance of the substrates to the active site region. The structures provide information on the role of specific residues at the active site and the entrance. The results obtained from crystal structures are consistent with solution studies including mutational analysis. They lead to the proposal of a plausible mechanism of the action of the enzyme. | ||
- | + | Structure, Interactions and Action of Mycobacterium tuberculosis 3-Hydroxyisobutyric Acid Dehydrogenase.,Srikalaivani R, Singh A, Surolia A, Vijayan M Biochem J. 2018 Jun 29. pii: BCJ20180271. doi: 10.1042/BCJ20180271. PMID:29959185<ref>PMID:29959185</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | <div class="pdbe-citations 5y8j" style="background-color:#fffaf0;"></div> | |
- | [[Category: | + | == References == |
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: 3-hydroxyisobutyrate dehydrogenase]] | ||
[[Category: Singh, A]] | [[Category: Singh, A]] | ||
[[Category: Srikalaivani, R]] | [[Category: Srikalaivani, R]] | ||
+ | [[Category: Surolia, A]] | ||
+ | [[Category: Vijayan, M]] | ||
+ | [[Category: 3-hydroxy acid dehydrogenase]] | ||
+ | [[Category: Biosynthetic protein]] | ||
+ | [[Category: Enzyme substrate interaction]] | ||
+ | [[Category: Mechanism of enzyme action]] | ||
+ | [[Category: Oxidoreductase]] |
Revision as of 05:38, 11 July 2018
Mycobacterium tuberculosis 3-Hydroxyisobutyrate dehydrogenase (MtHIBADH) + (R)-3-hydroxyisobutyrate (R-HIBA)
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