This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5nqp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:02, 22 November 2023) (edit) (undo)
 
Line 1: Line 1:
==Structure of a fHbp(V1.4):PorA(P1.16) chimera. Fusion at fHbp position 151.==
==Structure of a fHbp(V1.4):PorA(P1.16) chimera. Fusion at fHbp position 151.==
-
<StructureSection load='5nqp' size='340' side='right' caption='[[5nqp]], [[Resolution|resolution]] 2.86&Aring;' scene=''>
+
<StructureSection load='5nqp' size='340' side='right'caption='[[5nqp]], [[Resolution|resolution]] 2.86&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5nqp]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"diplokokkus_intracellularis_meningitidis"_(sic)_weichselbaum_1887 "diplokokkus intracellularis meningitidis" (sic) weichselbaum 1887]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NQP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NQP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5nqp]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis Neisseria meningitidis] and [https://en.wikipedia.org/wiki/Neisseria_meningitidis_serogroup_C Neisseria meningitidis serogroup C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NQP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5NQP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.86&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">fhbp ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=487 "Diplokokkus intracellularis meningitidis" (sic) Weichselbaum 1887])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5nqp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nqp OCA], [http://pdbe.org/5nqp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nqp RCSB], [http://www.ebi.ac.uk/pdbsum/5nqp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nqp ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5nqp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nqp OCA], [https://pdbe.org/5nqp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5nqp RCSB], [https://www.ebi.ac.uk/pdbsum/5nqp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5nqp ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q6VS06_NEIME Q6VS06_NEIME] [https://www.uniprot.org/uniprot/OMPA1_NEIMC OMPA1_NEIMC] Serves as a slightly cation selective porin. Major antigen on the gonococcal cell surface and it may have pathogenic properties in addition to its porin activity.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Hollingshead, S]]
+
[[Category: Large Structures]]
-
[[Category: Johnson, S]]
+
[[Category: Neisseria meningitidis]]
-
[[Category: Lea, S M]]
+
[[Category: Neisseria meningitidis serogroup C]]
-
[[Category: Tang, C M]]
+
[[Category: Hollingshead S]]
-
[[Category: Chimeric]]
+
[[Category: Johnson S]]
-
[[Category: Complement]]
+
[[Category: Lea SM]]
-
[[Category: Immune system]]
+
[[Category: Tang CM]]
-
[[Category: Meningitis]]
+
-
[[Category: Vaccine]]
+

Current revision

Structure of a fHbp(V1.4):PorA(P1.16) chimera. Fusion at fHbp position 151.

PDB ID 5nqp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools