Cellobiohydrolase
From Proteopedia
(Difference between revisions)
| Line 15: | Line 15: | ||
{{#tree:id=OrganizedByTopic|openlevels=0| | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
| - | *Cellobiohydrolase I | + | *Cellobiohydrolase I or exoglucanase 1 |
**[[1cel]], [[4p1h]], [[4p1j]] – HjCBHI Cel7A catalytic domain – ''Hypocrea jecorina''<BR /> | **[[1cel]], [[4p1h]], [[4p1j]] – HjCBHI Cel7A catalytic domain – ''Hypocrea jecorina''<BR /> | ||
**[[2cel]], [[4cel]], [[1egn]], [[1q2b]] - HjCBHI catalytic domain (mutant) <BR /> | **[[2cel]], [[4cel]], [[1egn]], [[1q2b]] - HjCBHI catalytic domain (mutant) <BR /> | ||
| - | **[[1cbh]], [[2cbh]] – HjCBHI C terminal – NMR<BR /> | + | **[[1cbh]], [[2cbh]], [[5x34]], [[5x35]], [[5x36]], [[5x37]], [[5x38]] – HjCBHI C terminal – NMR<BR /> |
| + | **[[5x3c]] – HjCBHI C terminal (mutant) – NMR<br /> | ||
**[[1azh]], [[1az6]], [[1azj]], [[1azk]] - HjCBHI cellulose-binding domain (mutant) - NMR<BR /> | **[[1azh]], [[1az6]], [[1azj]], [[1azk]] - HjCBHI cellulose-binding domain (mutant) - NMR<BR /> | ||
**[[1gpi]] - PcCBHI Cel7D catalytic domain – ''Phanerochaete chrysosporium''<BR /> | **[[1gpi]] - PcCBHI Cel7D catalytic domain – ''Phanerochaete chrysosporium''<BR /> | ||
| Line 26: | Line 27: | ||
**[[5mcc]], [[5mcd]], [[5mce]], [[5mcf]], [[5mch]], [[5mci]], [[5mcj]], [[5mck]], [[5mcl]], [[5mcm]], [[5mcn]], [[4xnn]] – wfCBHI – water flea<br /> | **[[5mcc]], [[5mcd]], [[5mce]], [[5mcf]], [[5mch]], [[5mci]], [[5mcj]], [[5mck]], [[5mcl]], [[5mcm]], [[5mcn]], [[4xnn]] – wfCBHI – water flea<br /> | ||
**[[4zzv]], [[5amp]] - GcCBHI Cel7A catalytic domain – ''Galactomyces candidum''<br /> | **[[4zzv]], [[5amp]] - GcCBHI Cel7A catalytic domain – ''Galactomyces candidum''<br /> | ||
| + | **[[2mwk]], [[2mwj]] - TrCBHI Cel7A carbohydrate-binding module 1 domain – ''Trichoderma reesei''<br /> | ||
*''Cellobiohydrolase I binary complex'' | *''Cellobiohydrolase I binary complex'' | ||
| - | **[[3cel]] - HjCBHI Cel7A catalytic domain (mutant) + cellobiose<br /> | + | **[[3cel]], [[4uwt]] - HjCBHI Cel7A catalytic domain (mutant) + cellobiose<br /> |
| - | **[[5cel]], [[1q2e]] - HjCBHI Cel7A catalytic domain (mutant) + cellotetraose<br /> | + | **[[5cel]], [[1q2e]], [[4d5v]] - HjCBHI Cel7A catalytic domain (mutant) + cellotetraose<br /> |
| - | **[[6cel]] - HjCBHI Cel7A catalytic domain (mutant) + cellopentaose<br /> | + | **[[4d5q]] - HjCBHI Cel7A catalytic domain + cellopentaose<br /> |
| + | **[[6cel]], [[4d5o]], [[4d5p]] - HjCBHI Cel7A catalytic domain (mutant) + cellopentaose<br /> | ||
**[[7cel]] - HjCBHI catalytic domain (mutant) + glucose<br /> | **[[7cel]] - HjCBHI catalytic domain (mutant) + glucose<br /> | ||
**[[2v3i]], [[2v3r]] - HjCBHI Cel7A catalytic domain + phenanthrenolol<br /> | **[[2v3i]], [[2v3r]] - HjCBHI Cel7A catalytic domain + phenanthrenolol<br /> | ||
| - | **[[1dy4]] - TrCBHI Cel7A catalytic domain + propranolol | + | **[[1dy4]] - TrCBHI Cel7A catalytic domain + propranolol <BR /> |
| + | **[[4c4c]] - TrCBHI Cel7A catalytic domain (mutant) + cellononaose <br /> | ||
| + | **[[4c4d]], [[4d5i]], [[4d5j]] - TrCBHI Cel7A catalytic domain (mutant) + cellotrioside <br /> | ||
**[[1h46]] - PcCBHI Cel7D catalytic domain + propranolol<br /> | **[[1h46]] - PcCBHI Cel7D catalytic domain + propranolol<br /> | ||
**[[1z3t]] - PcCBHI Cel7D catalytic domain + cellobiose<br /> | **[[1z3t]] - PcCBHI Cel7D catalytic domain + cellobiose<br /> | ||
| Line 46: | Line 51: | ||
**[[4zzt]] - GcCBHI Cel7A catalytic domain + cellotraiose <br /> | **[[4zzt]] - GcCBHI Cel7A catalytic domain + cellotraiose <br /> | ||
| - | *Cellobiohydrolase II | + | *Cellobiohydrolase II or Cellobiohydrolase Cel6A or exoglucanase 2 |
**[[3cbh]] – HjCBHII core<BR /> | **[[3cbh]] – HjCBHII core<BR /> | ||
| Line 52: | Line 57: | ||
**[[1hgw]], [[1hgy]], [[1oc6]] – HjCBHII Cel6A catalytic domain (mutant) | **[[1hgw]], [[1hgy]], [[1oc6]] – HjCBHII Cel6A catalytic domain (mutant) | ||
| - | *''Cellobiohydrolase II | + | *''Cellobiohydrolase II complex'' |
**[[1bvw]] - HiCBHII catalytic domain + mannose – ''Humicola insolens''<BR /> | **[[1bvw]] - HiCBHII catalytic domain + mannose – ''Humicola insolens''<BR /> | ||
| + | **[[4au0]] - HjCBHII catalytic domain Cel6A (mutant) + cellobioside<br /> | ||
**[[2bvw]] - HiCBHII Cel6A catalytic domain + glucose + cellotetraose<br /> | **[[2bvw]] - HiCBHII Cel6A catalytic domain + glucose + cellotetraose<br /> | ||
**[[1gz1]], [[1oc5]] - HiCBHII Cel6A catalytic domain (mutant) + cellotetraose<br /> | **[[1gz1]], [[1oc5]] - HiCBHII Cel6A catalytic domain (mutant) + cellotetraose<br /> | ||
| Line 62: | Line 68: | ||
**[[1ocn]] - HiCBHII Cel6A catalytic domain (mutant) + isofagomine<BR /> | **[[1ocn]] - HiCBHII Cel6A catalytic domain (mutant) + isofagomine<BR /> | ||
**[[1qjw]] - TrCBHII Cel6A catalytic domain (mutant) + cellotetraose<br /> | **[[1qjw]] - TrCBHII Cel6A catalytic domain (mutant) + cellotetraose<br /> | ||
| + | **[[4ax6]], [[4ax7]] - TrCBHII Cel6A catalytic domain (mutant) + cellobioside<br /> | ||
**[[1qk0]] - TrCBHII Cel6A catalytic domain + polysaccharide<BR /> | **[[1qk0]] - TrCBHII Cel6A catalytic domain + polysaccharide<BR /> | ||
**[[1qk2]] - TrCBHII Cel6A catalytic domain + cellotetraose<br /> | **[[1qk2]] - TrCBHII Cel6A catalytic domain + cellotetraose<br /> | ||
| Line 74: | Line 81: | ||
**[[3vof]], [[3voj]] - CcCBHI Cel6C catalytic domain (mutant)<br /> | **[[3vof]], [[3voj]] - CcCBHI Cel6C catalytic domain (mutant)<br /> | ||
**[[4v1z]] – AfCBH Cel7A – ''Aspergillus fumigatus''<br /> | **[[4v1z]] – AfCBH Cel7A – ''Aspergillus fumigatus''<br /> | ||
| + | **[[2mte]] – CBH CelS residues 673-741 – ''Ruminiclostridium thermocellum'' - NMR<br /> | ||
*''Other cellobiohydrolases binary complex'' | *''Other cellobiohydrolases binary complex'' | ||
Revision as of 09:10, 9 April 2018
| |||||||||||
3D structures of cellobiohydrolase
Updated on 09-April-2018
References
- ↑ Divne C, Stahlberg J, Teeri TT, Jones TA. High-resolution crystal structures reveal how a cellulose chain is bound in the 50 A long tunnel of cellobiohydrolase I from Trichoderma reesei. J Mol Biol. 1998 Jan 16;275(2):309-25. PMID:9466911 doi:http://dx.doi.org/10.1006/jmbi.1997.1437
- ↑ Stahlberg J, Divne C, Koivula A, Piens K, Claeyssens M, Teeri TT, Jones TA. Activity studies and crystal structures of catalytically deficient mutants of cellobiohydrolase I from Trichoderma reesei. J Mol Biol. 1996 Nov 29;264(2):337-49. PMID:8951380 doi:http://dx.doi.org/10.1006/jmbi.1996.0644
