This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2gvf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2gvf.gif|left|200px]]
[[Image:2gvf.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2gvf |SIZE=350|CAPTION= <scene name='initialview01'>2gvf</scene>, resolution 2.50&Aring;
+
The line below this paragraph, containing "STRUCTURE_2gvf", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=NHN:(6R,8S,11S)-11-CYCLOHEXYL-N-(1-{[(2-{[(1S)-2-(DIMETHYLAMINO)-2-OXO-1-PHENYLETHYL]AMINO}-2-OXOETHYL)AMINO](OXO)ACETYL}BUTYL)-10,13-DIOXO-2,5-DIOXA-9,12-DIAZATRICYCLO[14.3.1.1~6,9~]HENICOSA-1(20),16,18-TRIENE-8-CARBOXAMIDE'>NHN</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_2gvf| PDB=2gvf | SCENE= }}
-
|RELATEDENTRY=[[1a1r|1A1R]], [[2fm2|2FM2]], [[1rgq|1RGQ]], [[2a4g|2A4G]], [[2a4r|2A4R]], [[2a4q|2A4Q]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gvf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gvf OCA], [http://www.ebi.ac.uk/pdbsum/2gvf PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2gvf RCSB]</span>
+
-
}}
+
'''HCV NS3-4A protease domain complexed with a macrocyclic ketoamide inhibitor, SCH419021'''
'''HCV NS3-4A protease domain complexed with a macrocyclic ketoamide inhibitor, SCH419021'''
Line 36: Line 33:
[[Category: Prongay, A.]]
[[Category: Prongay, A.]]
[[Category: Venkatraman, S.]]
[[Category: Venkatraman, S.]]
-
[[Category: hepatitis c]]
+
[[Category: Hepatitis c]]
-
[[Category: ketoamide inhibitor]]
+
[[Category: Ketoamide inhibitor]]
-
[[Category: protease]]
+
[[Category: Protease]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 05:35:08 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:22:10 2008''
+

Revision as of 02:35, 4 May 2008

Template:STRUCTURE 2gvf

HCV NS3-4A protease domain complexed with a macrocyclic ketoamide inhibitor, SCH419021


Overview

Synthesis and HCV NS3 serine protease inhibitory activity of 4-hydroxyproline derived macrocyclic inhibitors and SAR around this macrocyclic core is described in this communication. X-ray structure of inhibitor 38 bound to the protease is discussed.

About this Structure

2GVF is a Protein complex structure of sequences from Hepatitis c virus. Full crystallographic information is available from OCA.

Reference

P2-P4 macrocyclic inhibitors of hepatitis C virus NS3-4A serine protease., Arasappan A, Njoroge FG, Chen KX, Venkatraman S, Parekh TN, Gu H, Pichardo J, Butkiewicz N, Prongay A, Madison V, Girijavallabhan V, Bioorg Med Chem Lett. 2006 Aug 1;16(15):3960-5. Epub 2006 May 30. PMID:16730985 Page seeded by OCA on Sun May 4 05:35:08 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools