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Sandbox GGC12
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
| - | This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein | + | This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. |
The structure of IL-6 is composed of four helices: A, B, C, and D. Helices A and B run in opposite direction to helices C and D. Helix A is connected to B which is connected to C; then C is connected to D. | The structure of IL-6 is composed of four helices: A, B, C, and D. Helices A and B run in opposite direction to helices C and D. Helix A is connected to B which is connected to C; then C is connected to D. | ||
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<scene name='78/781196/Helix_b/1'>Here you are able to get a clear view of Helix B. </scene> | <scene name='78/781196/Helix_b/1'>Here you are able to get a clear view of Helix B. </scene> | ||
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| + | <scene name='78/781196/Disulfide_linkage_aandb/2'>Here you are able to get a clear view of the disulfide linkage between Helix A and Helix B. </scene> | ||
<scene name='78/781196/View_of_the_water_structure/1'>Here you are able to get a view of the water structure in the region between the D helix and the A-B loop of IL-6. </scene> The water molecules are shown as red spheres. The A-B loop is shown in brown with a yellow disulfide linkage near F74 which is displayed in pink. The D helix is shown in black. Q175 is shown in green. R179 is shown in blue. | <scene name='78/781196/View_of_the_water_structure/1'>Here you are able to get a view of the water structure in the region between the D helix and the A-B loop of IL-6. </scene> The water molecules are shown as red spheres. The A-B loop is shown in brown with a yellow disulfide linkage near F74 which is displayed in pink. The D helix is shown in black. Q175 is shown in green. R179 is shown in blue. | ||
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| - | <scene name='78/781196/Disulfide_linkage_aandb/2'>Here you are able to get a clear view of the disulfide linkage between Helix A and Helix B. </scene> | ||
</StructureSection> | </StructureSection> | ||
== References == | == References == | ||
<references/> | <references/> | ||
Revision as of 23:15, 22 April 2018
Structure: Human Interleukin-6
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References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
