This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2a8k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Structural and Mutational Studies of the Catalytic Domain of Colicin E5a tRNA-Specific Ribonuclease==
==Structural and Mutational Studies of the Catalytic Domain of Colicin E5a tRNA-Specific Ribonuclease==
-
<StructureSection load='2a8k' size='340' side='right' caption='[[2a8k]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+
<StructureSection load='2a8k' size='340' side='right'caption='[[2a8k]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2a8k]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A8K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2A8K FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2a8k]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A8K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2A8K FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">col ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">col ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a8k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a8k OCA], [http://pdbe.org/2a8k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2a8k RCSB], [http://www.ebi.ac.uk/pdbsum/2a8k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2a8k ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2a8k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a8k OCA], [https://pdbe.org/2a8k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2a8k RCSB], [https://www.ebi.ac.uk/pdbsum/2a8k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2a8k ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CEA5_ECOLX CEA5_ECOLX]] Colicins are polypeptide toxins produced by and active against E.coli and closely related bacteria. This colicin is an endonuclease.
+
[[https://www.uniprot.org/uniprot/CEA5_ECOLX CEA5_ECOLX]] Colicins are polypeptide toxins produced by and active against E.coli and closely related bacteria. This colicin is an endonuclease.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 31: Line 31:
==See Also==
==See Also==
-
*[[Colicin|Colicin]]
+
*[[Colicin 3D structures|Colicin 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 37: Line 37:
</StructureSection>
</StructureSection>
[[Category: Bacillus coli migula 1895]]
[[Category: Bacillus coli migula 1895]]
 +
[[Category: Large Structures]]
[[Category: Elias, Y]]
[[Category: Elias, Y]]
[[Category: Huang, R H]]
[[Category: Huang, R H]]

Revision as of 08:27, 27 January 2021

Structural and Mutational Studies of the Catalytic Domain of Colicin E5a tRNA-Specific Ribonuclease

PDB ID 2a8k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools