2i69

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[[Image:2i69.gif|left|200px]]
[[Image:2i69.gif|left|200px]]
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{{Structure
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|PDB= 2i69 |SIZE=350|CAPTION= <scene name='initialview01'>2i69</scene>, resolution 3.11&Aring;
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The line below this paragraph, containing "STRUCTURE_2i69", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=FUL:BETA-L-FUCOSE'>FUL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY=
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or leave the SCENE parameter empty for the default display.
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|GENE= Envelope protein ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11082 West Nile virus])
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|DOMAIN=
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{{STRUCTURE_2i69| PDB=2i69 | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2i69 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i69 OCA], [http://www.ebi.ac.uk/pdbsum/2i69 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2i69 RCSB]</span>
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'''Crystal structure of the West Nile virus envelope glycoprotein'''
'''Crystal structure of the West Nile virus envelope glycoprotein'''
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[[Category: Kanai, R.]]
[[Category: Kanai, R.]]
[[Category: Modis, Y.]]
[[Category: Modis, Y.]]
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[[Category: antibody epitope]]
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[[Category: Antibody epitope]]
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[[Category: beta sandwich]]
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[[Category: Beta sandwich]]
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[[Category: glycoprotein]]
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[[Category: Glycoprotein]]
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[[Category: igc]]
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[[Category: Igc]]
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[[Category: receptor binding]]
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[[Category: Receptor binding]]
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[[Category: viral membrane fusion protein]]
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[[Category: Viral membrane fusion protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 07:07:35 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:40:16 2008''
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Revision as of 04:07, 4 May 2008

Template:STRUCTURE 2i69

Crystal structure of the West Nile virus envelope glycoprotein


Overview

West Nile virus, a member of the Flavivirus genus, causes fever that can progress to life-threatening encephalitis. The major envelope glycoprotein, E, of these viruses mediates viral attachment and entry by membrane fusion. We have determined the crystal structure of a soluble fragment of West Nile virus E. The structure adopts the same overall fold as that of the E proteins from dengue and tick-borne encephalitis viruses. The conformation of domain II is different from that in other prefusion E structures, however, and resembles the conformation of domain II in postfusion E structures. The epitopes of neutralizing West Nile virus-specific antibodies map to a region of domain III that is exposed on the viral surface and has been implicated in receptor binding. In contrast, we show that certain recombinant therapeutic antibodies, which cross-neutralize West Nile and dengue viruses, bind a peptide from domain I that is exposed only during the membrane fusion transition. By revealing the details of the molecular landscape of the West Nile virus surface, our structure will assist the design of antiviral vaccines and therapeutics.

About this Structure

2I69 is a Single protein structure of sequence from West nile virus. Full crystallographic information is available from OCA.

Reference

Crystal structure of west nile virus envelope glycoprotein reveals viral surface epitopes., Kanai R, Kar K, Anthony K, Gould LH, Ledizet M, Fikrig E, Marasco WA, Koski RA, Modis Y, J Virol. 2006 Nov;80(22):11000-8. Epub 2006 Aug 30. PMID:16943291 Page seeded by OCA on Sun May 4 07:07:35 2008

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