This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5kkk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:02, 27 September 2023) (edit) (undo)
 
Line 1: Line 1:
==1.7-Angstrom In situ Mylar structure of sperm whale myoglobin (SWMb-CO) at 100 K==
==1.7-Angstrom In situ Mylar structure of sperm whale myoglobin (SWMb-CO) at 100 K==
-
<StructureSection load='5kkk' size='340' side='right' caption='[[5kkk]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+
<StructureSection load='5kkk' size='340' side='right'caption='[[5kkk]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5kkk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Phycd Phycd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KKK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KKK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5kkk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KKK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5KKK FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5kkh|5kkh]], [[5kki|5kki]], [[5kkj|5kkj]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9755 PHYCD])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5kkk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kkk OCA], [https://pdbe.org/5kkk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5kkk RCSB], [https://www.ebi.ac.uk/pdbsum/5kkk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5kkk ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5kkk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kkk OCA], [http://pdbe.org/5kkk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5kkk RCSB], [http://www.ebi.ac.uk/pdbsum/5kkk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5kkk ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/MYG_PHYCD MYG_PHYCD]] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
+
[https://www.uniprot.org/uniprot/MYG_PHYMC MYG_PHYMC] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 21:
==See Also==
==See Also==
-
*[[Myoglobin|Myoglobin]]
+
*[[Myoglobin 3D structures|Myoglobin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Phycd]]
+
[[Category: Large Structures]]
-
[[Category: Broecker, J]]
+
[[Category: Physeter catodon]]
-
[[Category: Ernst, O P]]
+
[[Category: Broecker J]]
-
[[Category: Oxygen transport]]
+
[[Category: Ernst OP]]

Current revision

1.7-Angstrom In situ Mylar structure of sperm whale myoglobin (SWMb-CO) at 100 K

PDB ID 5kkk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5kkk"
Personal tools