2j0t

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2j0t.jpg|left|200px]]
[[Image:2j0t.jpg|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2j0t |SIZE=350|CAPTION= <scene name='initialview01'>2j0t</scene>, resolution 2.54&Aring;
+
The line below this paragraph, containing "STRUCTURE_2j0t", creates the "Structure Box" on the page.
-
|SITE= <scene name='pdbsite=AC1:Ca+Binding+Site+For+Chain+C'>AC1</scene>
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Interstitial_collagenase Interstitial collagenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.24.7 3.4.24.7] </span>
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_2j0t| PDB=2j0t | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2j0t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j0t OCA], [http://www.ebi.ac.uk/pdbsum/2j0t PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2j0t RCSB]</span>
+
-
}}
+
'''CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF MMP-1 IN COMPLEX WITH THE INHIBITORY DOMAIN OF TIMP-1'''
'''CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF MMP-1 IN COMPLEX WITH THE INHIBITORY DOMAIN OF TIMP-1'''
Line 30: Line 27:
[[Category: Iyer, S.]]
[[Category: Iyer, S.]]
[[Category: Wei, S.]]
[[Category: Wei, S.]]
-
[[Category: autocatalytic cleavage]]
+
[[Category: Autocatalytic cleavage]]
-
[[Category: calcium]]
+
[[Category: Calcium]]
-
[[Category: collagen degradation]]
+
[[Category: Collagen degradation]]
-
[[Category: collagenase]]
+
[[Category: Collagenase]]
-
[[Category: erythrocyte maturation]]
+
[[Category: Erythrocyte maturation]]
-
[[Category: extracellular matrix]]
+
[[Category: Extracellular matrix]]
-
[[Category: glycoprotein]]
+
[[Category: Glycoprotein]]
-
[[Category: hydrolase]]
+
[[Category: Hydrolase]]
-
[[Category: matrix metalloprotease]]
+
[[Category: Matrix metalloprotease]]
-
[[Category: metal-binding]]
+
[[Category: Metal-binding]]
-
[[Category: metalloenzyme inhibitor]]
+
[[Category: Metalloenzyme inhibitor]]
-
[[Category: metalloprotease]]
+
[[Category: Metalloprotease]]
-
[[Category: metalloprotease inhibitor]]
+
[[Category: Metalloprotease inhibitor]]
-
[[Category: ob fold]]
+
[[Category: Ob fold]]
-
[[Category: polymorphism]]
+
[[Category: Polymorphism]]
-
[[Category: protease]]
+
[[Category: Protease]]
-
[[Category: tissue inhibitor of metalloproteinase]]
+
[[Category: Tissue inhibitor of metalloproteinase]]
-
[[Category: zinc]]
+
[[Category: Zinc]]
-
[[Category: zymogen]]
+
[[Category: Zymogen]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 08:10:53 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:51:29 2008''
+

Revision as of 05:10, 4 May 2008

Image:2j0t.jpg

Template:STRUCTURE 2j0t

CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF MMP-1 IN COMPLEX WITH THE INHIBITORY DOMAIN OF TIMP-1


Overview

The mammalian collagenases are a subgroup of the matrix metalloproteinases (MMPs) that are uniquely able to cleave triple helical fibrillar collagens. Collagen breakdown is an essential part of extracellular matrix turnover in key physiological processes including morphogenesis and wound healing; however, unregulated collagenolysis is linked to important diseases such as arthritis and cancer. The tissue inhibitors of metalloproteinases (TIMPs) function in controlling the activity of MMPs, including collagenases. We report here the structure of a complex of the catalytic domain of fibroblast collagenase (MMP-1) with the N-terminal inhibitory domain of human TIMP-1 (N-TIMP-1) at 2.54 A resolution. Comparison with the previously reported structure of the TIMP-1/stromelysin-1 (MMP-3) complex shows that the mechanisms of inhibition of both MMPs are generally similar, yet there are significant differences in the protein-protein interfaces in the two complexes. Specifically, the loop between beta-strands A and B of TIMP-1 makes contact with MMP-3 but not with MMP-1, and there are marked differences in the roles of individual residues in the C-D connector of TIMP-1 in binding to the two MMPs. Structural rearrangements in the bound MMPs are also strikingly different. This is the first crystallographic structure that contains the truncated N-terminal domain of a TIMP, which shows only minor differences from the corresponding region of the full-length protein. Differences in the interactions in the two TIMP-1 complexes provide a structural explanation for the results of previous mutational studies and a basis for designing new N-TIMP-1 variants with restricted specificity.

About this Structure

2J0T is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.

Reference

Crystal structure of the catalytic domain of matrix metalloproteinase-1 in complex with the inhibitory domain of tissue inhibitor of metalloproteinase-1., Iyer S, Wei S, Brew K, Acharya KR, J Biol Chem. 2007 Jan 5;282(1):364-71. Epub 2006 Oct 18. PMID:17050530 Page seeded by OCA on Sun May 4 08:10:53 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2j0t"
Personal tools