6go0

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'''Unreleased structure'''
 
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The entry 6go0 is ON HOLD until Paper Publication
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==PLANTARICIN S-B IN 100 MM DPC MICELLES. THIS IS THE BETA PART OF THE BACTERIOCIN PLANTARICIN S==
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<StructureSection load='6go0' size='340' side='right' caption='[[6go0]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6go0]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GO0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6GO0 FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6go0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6go0 OCA], [http://pdbe.org/6go0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6go0 RCSB], [http://www.ebi.ac.uk/pdbsum/6go0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6go0 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The structure of the individual peptides of the two-peptide bacteriocin plantaricin S, an antimicrobial peptide produced by a Lactobacillus plantarum strain, has been determined in DPC micelles. The two peptides of plantaricin S, Pls-alpha and Pls-beta, form an alpha-helix from and including residue 8 to 24 with a less structured region around residue 16-19 and an amphiphilic alpha-helix from and including residue 7 to 23, respectively. Activity assays on single amino acid-substituted GxxxG and GxxxG-like motifs show that substituting the Ser and Gly residues in the G9xxxG13 motif in Pls-alpha and the S17xxxG21 motif in Pls-beta reduced or drastically reduced the antimicrobial activity. The two-peptide bacteriocin muricidin contains GxxxG-like motifs at similar positions and displays 40-50% amino acid identity with plantaricin S. Activity assays of combinations of the peptides that constitute the bacteriocins plantaricin S and muricidin show that some combinations are highly active. Furthermore, sequence alignments show that the motifs important for plantaricin S activity align with identical motifs in muricidin. Based on sequence comparison and activity assays, a membrane-inserted model of plantaricin S in which the two peptides are oriented antiparallel relative to each other and where the GxxxG and GxxxG-like motifs important for activity come close in space, is proposed.
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Authors:
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NMR structures and mutational analysis of the two peptides constituting the bacteriocin plantaricin S.,Ekblad B, Kristiansen PE Sci Rep. 2019 Feb 20;9(1):2333. doi: 10.1038/s41598-019-38518-6. PMID:30787405<ref>PMID:30787405</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 6go0" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Ekblad, B]]
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[[Category: Kristiansen, P E]]
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[[Category: Antimicrobial protein]]
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[[Category: Antimicrobial protein bacteriocin menbrane interacting peptide]]

Revision as of 07:28, 6 March 2019

PLANTARICIN S-B IN 100 MM DPC MICELLES. THIS IS THE BETA PART OF THE BACTERIOCIN PLANTARICIN S

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