5m6b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:27, 1 November 2023) (edit) (undo)
 
Line 1: Line 1:
==structure of recombinant mushroom tyrosinase (abPPO4)==
==structure of recombinant mushroom tyrosinase (abPPO4)==
-
<StructureSection load='5m6b' size='340' side='right' caption='[[5m6b]], [[Resolution|resolution]] 3.25&Aring;' scene=''>
+
<StructureSection load='5m6b' size='340' side='right'caption='[[5m6b]], [[Resolution|resolution]] 3.25&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5m6b]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Agabi Agabi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M6B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5M6B FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5m6b]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Agaricus_bisporus Agaricus bisporus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M6B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5M6B FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=O:OXYGEN+ATOM'>O</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.25&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PPO4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5341 AGABI])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=O:OXYGEN+ATOM'>O</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Tyrosinase Tyrosinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.18.1 1.14.18.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5m6b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m6b OCA], [https://pdbe.org/5m6b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5m6b RCSB], [https://www.ebi.ac.uk/pdbsum/5m6b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5m6b ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5m6b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m6b OCA], [http://pdbe.org/5m6b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5m6b RCSB], [http://www.ebi.ac.uk/pdbsum/5m6b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5m6b ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PPO4_AGABI PPO4_AGABI]] Copper-containing oxidase that catalyzes both the o-hydroxylation of monophenols and the subsequent oxidation of the resulting o-diphenols into reactive o-quinones, which evolve spontaneously to produce intermediates, which associate in dark brown pigments. Involved in the initial step of melanin synthesis. Melanins constitute a mechanism of defense and resistance to stress such as UV radiations, free radicals, gamma rays, dehydratation and extreme temperatures, and contribute to the fungal cell-wall resistance against hydrolytic enzymes in avoiding cellular lysis. Fungal pigments are also involved in the formation and stability of spores (By similarity).
+
[https://www.uniprot.org/uniprot/PPO4_AGABI PPO4_AGABI] Copper-containing oxidase that catalyzes both the o-hydroxylation of monophenols and the subsequent oxidation of the resulting o-diphenols into reactive o-quinones, which evolve spontaneously to produce intermediates, which associate in dark brown pigments. Involved in the initial step of melanin synthesis. Melanins constitute a mechanism of defense and resistance to stress such as UV radiations, free radicals, gamma rays, dehydratation and extreme temperatures, and contribute to the fungal cell-wall resistance against hydrolytic enzymes in avoiding cellular lysis. Fungal pigments are also involved in the formation and stability of spores (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 21:
==See Also==
==See Also==
-
*[[Tyrosinase|Tyrosinase]]
+
*[[Tyrosinase 3D structures|Tyrosinase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Agabi]]
 
-
[[Category: Tyrosinase]]
 
-
[[Category: Bijelic, A]]
 
-
[[Category: Pretzler, M]]
 
-
[[Category: Rompel, A]]
 
[[Category: Agaricus bisporus]]
[[Category: Agaricus bisporus]]
-
[[Category: Heterologous expression]]
+
[[Category: Large Structures]]
-
[[Category: Oxidoreductase]]
+
[[Category: Bijelic A]]
-
[[Category: Polyphenol oxidase]]
+
[[Category: Pretzler M]]
-
[[Category: Tyrosinase activity]]
+
[[Category: Rompel A]]

Current revision

structure of recombinant mushroom tyrosinase (abPPO4)

PDB ID 5m6b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools