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2gja
From Proteopedia
(Difference between revisions)
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==Structure of the MnmE G-domain in complex with GDP*AlF4-, Mg2+ and NH4+== | ==Structure of the MnmE G-domain in complex with GDP*AlF4-, Mg2+ and NH4+== | ||
| - | <StructureSection load='2gja' size='340' side='right' caption='[[2gja]], [[Resolution|resolution]] 1.85Å' scene=''> | + | <StructureSection load='2gja' size='340' side='right'caption='[[2gja]], [[Resolution|resolution]] 1.85Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2gja]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2gja]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecobd Ecobd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GJA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GJA FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ALF:TETRAFLUOROALUMINATE+ION'>ALF</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ALF:TETRAFLUOROALUMINATE+ION'>ALF</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1xzp|1xzp]], [[1xzq|1xzq]], [[1rfl|1rfl]], [[2gj8|2gj8]], [[2gj9|2gj9]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1xzp|1xzp]], [[1xzq|1xzq]], [[1rfl|1rfl]], [[2gj8|2gj8]], [[2gj9|2gj9]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">trmE, mnmE, thdF ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">trmE, mnmE, thdF ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=469008 ECOBD])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gja FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gja OCA], [https://pdbe.org/2gja PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gja RCSB], [https://www.ebi.ac.uk/pdbsum/2gja PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gja ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/MNME_ECOLI MNME_ECOLI]] Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Ecobd]] | [[Category: Ecobd]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Scrima, A]] | [[Category: Scrima, A]] | ||
[[Category: Wittinghofer, A]] | [[Category: Wittinghofer, A]] | ||
Revision as of 19:06, 10 March 2021
Structure of the MnmE G-domain in complex with GDP*AlF4-, Mg2+ and NH4+
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