5zvm
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
- | '''Unreleased structure''' | ||
- | + | ==Crystal Structure of the Human Coronavirus SARS HR1 motif in complex with pan-CoVs inhibitor EK1== | |
- | + | <StructureSection load='5zvm' size='340' side='right'caption='[[5zvm]], [[Resolution|resolution]] 3.30Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[5zvm]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZVM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ZVM FirstGlance]. <br> | |
- | + | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5zvk|5zvk]], [[5zuv|5zuv]]</td></tr> | |
- | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5zvm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zvm OCA], [http://pdbe.org/5zvm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5zvm RCSB], [http://www.ebi.ac.uk/pdbsum/5zvm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5zvm ProSAT]</span></td></tr> |
+ | </table> | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/SPIKE_CVHSA SPIKE_CVHSA]] S1 attaches the virion to the cell membrane by interacting with human ACE2 and CLEC4M/DC-SIGNR, initiating the infection. Binding to the receptor and internalization of the virus into the endosomes of the host cell probably induces conformational changes in the S glycoprotein. Proteolysis by cathepsin CTSL may unmask the fusion peptide of S2 and activate membranes fusion within endosomes. S2 is a class I viral fusion protein. Under the current model, the protein has at least three conformational states: pre-fusion native state, pre-hairpin intermediate state, and post-fusion hairpin state. During viral and target cell membrane fusion, the coiled coil regions (heptad repeats) assume a trimer-of-hairpins structure, positioning the fusion peptide in close proximity to the C-terminal region of the ectodomain. The formation of this structure appears to drive apposition and subsequent fusion of viral and target cell membranes. | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Wilson, I A]] | ||
+ | [[Category: Yan, L]] | ||
+ | [[Category: Yang, B]] | ||
+ | [[Category: Hr1 motif]] | ||
+ | [[Category: Pan-coronavirus]] | ||
+ | [[Category: S2 domain]] | ||
+ | [[Category: Sar]] | ||
+ | [[Category: Spike protein]] | ||
+ | [[Category: Viral protein-inhibitor complex]] |
Revision as of 07:06, 10 April 2019
Crystal Structure of the Human Coronavirus SARS HR1 motif in complex with pan-CoVs inhibitor EK1
|