6dvr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "6dvr" [edit=sysop:move=sysop])
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6dvr is ON HOLD
+
==Crystal structure of human CARM1 with (R)-SKI-72==
-
 
+
<StructureSection load='6dvr' size='340' side='right' caption='[[6dvr]], [[Resolution|resolution]] 1.54&Aring;' scene=''>
-
Authors: Dong, A., Zeng, H., Hutchinson, A., Seitova, A., Luo, M., Cai, X.C., Ke, W., Wang, J., Shi, C., Zheng, W., Lee, J.P., Ibanez, G., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Brown, P.J., Structural Genomics Consortium (SGC)
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[6dvr]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DVR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6DVR FirstGlance]. <br>
-
Description: Crystal structure of human CARM1 with (R)-SKI-72
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HDG:(2R,5S)-2-amino-6-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]-5-[(benzylamino)methyl]-N-[2-(4-methoxyphenyl)ethyl]hexanamide+(non-preferred+name)'>HDG</scene>, <scene name='pdbligand=P15:2,5,8,11,14,17-HEXAOXANONADECAN-19-OL'>P15</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Type_I_protein_arginine_methyltransferase Type I protein arginine methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.319 2.1.1.319] </span></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6dvr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dvr OCA], [http://pdbe.org/6dvr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dvr RCSB], [http://www.ebi.ac.uk/pdbsum/6dvr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dvr ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[[http://www.uniprot.org/uniprot/CARM1_HUMAN CARM1_HUMAN]] Methylates (mono- and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in several proteins involved in DNA packaging, transcription regulation, pre-mRNA splicing, and mRNA stability. Recruited to promoters upon gene activation together with histone acetyltransferases from EP300/P300 and p160 families, methylates histone H3 at 'Arg-17' (H3R17me), forming mainly asymmetric dimethylarginine (H3R17me2a), leading to activate transcription via chromatin remodeling. During nuclear hormone receptor activation and TCF7L2/TCF4 activation, acts synergically with EP300/P300 and either one of the p160 histone acetyltransferases NCOA1/SRC1, NCOA2/GRIP1 and NCOA3/ACTR or CTNNB1/beta-catenin to activate transcription. During myogenic transcriptional activation, acts together with NCOA3/ACTR as a coactivator for MEF2C. During monocyte inflammatory stimulation, acts together with EP300/P300 as a coactivator for NF-kappa-B. Acts as coactivator for PPARG, promotes adipocyte differentiation and the accumulation of brown fat tissue. Plays a role in the regulation of pre-mRNA alternative splicing by methylation of splicing factors. Also seems to be involved in p53/TP53 transcriptional activation. Methylates EP300/P300, both at 'Arg-2142', which may loosen its interaction with NCOA2/GRIP1, and at 'Arg-580' and 'Arg-604' in the KIX domain, which impairs its interaction with CREB and inhibits CREB-dependent transcriptional activation. Also methylates arginine residues in RNA-binding proteins PABPC1, ELAVL1 and ELAV4, which may affect their mRNA-stabilizing properties and the half-life of their target mRNAs.<ref>PMID:16497732</ref> <ref>PMID:19405910</ref>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Type I protein arginine methyltransferase]]
 +
[[Category: Arrowsmith, C H]]
 +
[[Category: Bountra, C]]
 +
[[Category: Brown, P J]]
 +
[[Category: Cai, X C]]
 +
[[Category: Dong, A]]
 +
[[Category: Edwards, A M]]
[[Category: Hutchinson, A]]
[[Category: Hutchinson, A]]
 +
[[Category: Ibanez, G]]
[[Category: Ke, W]]
[[Category: Ke, W]]
-
[[Category: Ibanez, G]]
+
[[Category: Lee, J P]]
-
[[Category: Arrowsmith, C.H]]
+
[[Category: Luo, M]]
 +
[[Category: Structural genomic]]
[[Category: Seitova, A]]
[[Category: Seitova, A]]
-
[[Category: Dong, A]]
 
-
[[Category: Lee, J.P]]
 
-
[[Category: Luo, M]]
 
-
[[Category: Brown, P.J]]
 
-
[[Category: Zeng, H]]
 
[[Category: Shi, C]]
[[Category: Shi, C]]
-
[[Category: Cai, X.C]]
 
-
[[Category: Edwards, A.M]]
 
-
[[Category: Structural Genomics Consortium (Sgc)]]
 
[[Category: Wang, J]]
[[Category: Wang, J]]
 +
[[Category: Zeng, H]]
[[Category: Zheng, W]]
[[Category: Zheng, W]]
-
[[Category: Bountra, C]]
+
[[Category: Carm1]]
 +
[[Category: Prmt4]]
 +
[[Category: Sgc]]
 +
[[Category: Ski-72 inhibitor]]
 +
[[Category: Transferase-transferase inhibitor complex]]

Revision as of 07:20, 25 July 2018

Crystal structure of human CARM1 with (R)-SKI-72

6dvr, resolution 1.54Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools