6dvr
From Proteopedia
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- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of human CARM1 with (R)-SKI-72== | |
- | + | <StructureSection load='6dvr' size='340' side='right' caption='[[6dvr]], [[Resolution|resolution]] 1.54Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[6dvr]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DVR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6DVR FirstGlance]. <br> | |
- | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HDG:(2R,5S)-2-amino-6-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]-5-[(benzylamino)methyl]-N-[2-(4-methoxyphenyl)ethyl]hexanamide+(non-preferred+name)'>HDG</scene>, <scene name='pdbligand=P15:2,5,8,11,14,17-HEXAOXANONADECAN-19-OL'>P15</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr> | |
- | [[Category: | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Type_I_protein_arginine_methyltransferase Type I protein arginine methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.319 2.1.1.319] </span></td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6dvr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dvr OCA], [http://pdbe.org/6dvr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dvr RCSB], [http://www.ebi.ac.uk/pdbsum/6dvr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dvr ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/CARM1_HUMAN CARM1_HUMAN]] Methylates (mono- and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in several proteins involved in DNA packaging, transcription regulation, pre-mRNA splicing, and mRNA stability. Recruited to promoters upon gene activation together with histone acetyltransferases from EP300/P300 and p160 families, methylates histone H3 at 'Arg-17' (H3R17me), forming mainly asymmetric dimethylarginine (H3R17me2a), leading to activate transcription via chromatin remodeling. During nuclear hormone receptor activation and TCF7L2/TCF4 activation, acts synergically with EP300/P300 and either one of the p160 histone acetyltransferases NCOA1/SRC1, NCOA2/GRIP1 and NCOA3/ACTR or CTNNB1/beta-catenin to activate transcription. During myogenic transcriptional activation, acts together with NCOA3/ACTR as a coactivator for MEF2C. During monocyte inflammatory stimulation, acts together with EP300/P300 as a coactivator for NF-kappa-B. Acts as coactivator for PPARG, promotes adipocyte differentiation and the accumulation of brown fat tissue. Plays a role in the regulation of pre-mRNA alternative splicing by methylation of splicing factors. Also seems to be involved in p53/TP53 transcriptional activation. Methylates EP300/P300, both at 'Arg-2142', which may loosen its interaction with NCOA2/GRIP1, and at 'Arg-580' and 'Arg-604' in the KIX domain, which impairs its interaction with CREB and inhibits CREB-dependent transcriptional activation. Also methylates arginine residues in RNA-binding proteins PABPC1, ELAVL1 and ELAV4, which may affect their mRNA-stabilizing properties and the half-life of their target mRNAs.<ref>PMID:16497732</ref> <ref>PMID:19405910</ref> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Type I protein arginine methyltransferase]] | ||
+ | [[Category: Arrowsmith, C H]] | ||
+ | [[Category: Bountra, C]] | ||
+ | [[Category: Brown, P J]] | ||
+ | [[Category: Cai, X C]] | ||
+ | [[Category: Dong, A]] | ||
+ | [[Category: Edwards, A M]] | ||
[[Category: Hutchinson, A]] | [[Category: Hutchinson, A]] | ||
+ | [[Category: Ibanez, G]] | ||
[[Category: Ke, W]] | [[Category: Ke, W]] | ||
- | [[Category: | + | [[Category: Lee, J P]] |
- | [[Category: | + | [[Category: Luo, M]] |
+ | [[Category: Structural genomic]] | ||
[[Category: Seitova, A]] | [[Category: Seitova, A]] | ||
- | [[Category: Dong, A]] | ||
- | [[Category: Lee, J.P]] | ||
- | [[Category: Luo, M]] | ||
- | [[Category: Brown, P.J]] | ||
- | [[Category: Zeng, H]] | ||
[[Category: Shi, C]] | [[Category: Shi, C]] | ||
- | [[Category: Cai, X.C]] | ||
- | [[Category: Edwards, A.M]] | ||
- | [[Category: Structural Genomics Consortium (Sgc)]] | ||
[[Category: Wang, J]] | [[Category: Wang, J]] | ||
+ | [[Category: Zeng, H]] | ||
[[Category: Zheng, W]] | [[Category: Zheng, W]] | ||
- | [[Category: | + | [[Category: Carm1]] |
+ | [[Category: Prmt4]] | ||
+ | [[Category: Sgc]] | ||
+ | [[Category: Ski-72 inhibitor]] | ||
+ | [[Category: Transferase-transferase inhibitor complex]] |
Revision as of 07:20, 25 July 2018
Crystal structure of human CARM1 with (R)-SKI-72
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Categories: Type I protein arginine methyltransferase | Arrowsmith, C H | Bountra, C | Brown, P J | Cai, X C | Dong, A | Edwards, A M | Hutchinson, A | Ibanez, G | Ke, W | Lee, J P | Luo, M | Structural genomic | Seitova, A | Shi, C | Wang, J | Zeng, H | Zheng, W | Carm1 | Prmt4 | Sgc | Ski-72 inhibitor | Transferase-transferase inhibitor complex