Hemoglobin 3D structures

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Line 4: Line 4:
*Hemoglobin α subunit + β subunit
*Hemoglobin α subunit + β subunit
-
**[[3mkb]] – Hb α+β – Mako shark<br />
+
**[[3odq]], [[3kmf]], [[3dut]], [[2dn2]], [[1xxt]], [[1xz2]], [[1rq3]], [[1uiw]], [[1kd2]], [[1lfl]], [[1dke]], [[1qi8]], [[1a3n]], [[2hhd]], [[2hhe]], [[1hga]], [[1hgb]], [[1hgc]], [[2hhb]], [[3hhb]], [[4hhb]], [[2hbs]], [[1a3o]], [[1hbs]], [[3p5q]], [[4n7n]] - hHb α+β - human<br />
-
**[[3mjp]] - Hb α+β - Japanese quail<br />
+
-
**[[3mju]] - pHb α+β - pigeon<br />
+
-
**[[5ker]], [[4h2l]] - Hb α+β - deer mouse<br />
+
-
**[[4yu4]], [[4yu3]] - Hb α+β - mongoose<br />
+
-
**[[3odq]], [[3kmf]], [[3dut]], [[2dn2]], [[1xxt]], [[1xz2]], [[1rq3]], [[1uiw]], [[1kd2]], [[1lfl]], [[1dke]], [[1qi8]], [[1a3n]], [[2hhd]], [[2hhe]], [[1hga]], [[1hgb]], [[1hgc]], [[2hhb]], [[3hhb]], [[4hhb]], [[2hbs]], [[1a3o]], [[1hbs]], [[3p5q]], [[4n7n]] - hHb α+β human<br />
+
**[[5ni1]] - hHb α+β - Volta phase<br />
**[[5ni1]] - hHb α+β - Volta phase<br />
**[[2dxm]] - hHb α+β – neutron<br />
**[[2dxm]] - hHb α+β – neutron<br />
Line 21: Line 16:
**[[1fdh]] - hHb α+β F<br />
**[[1fdh]] - hHb α+β F<br />
**[[2hbs]] - hHb α+β S (mutant)<br />
**[[2hbs]] - hHb α+β S (mutant)<br />
-
**[[3pel]], [[3gou]], [[2qls]] - Hb α+β dog<br />
+
**[[3pi8]], [[3pi9]], [[3pia]], [[2qsp]], [[2qss]], [[1hda]] - bHb α+β - bovine<br />
-
**[[3ng6]], [[3nfe]], [[2aa1]] - TnHb α+β ''Trematomus newnesi''<br />
+
**[[1hds]] - Hb α+β S – white-tail deer<br />
-
**[[3hyu]] - GpHb α+β - Guinea pig<br />
+
**[[3pel]], [[3gou]], [[2qls]] - Hb α+β - dog<br />
 +
**[[3hyu]] - gpHb α+β - Guinea pig<br />
 +
**[[3lqd]] - Hb α+β - European hare<br />
**[[3dht]] - rHb α+β – rat<br />
**[[3dht]] - rHb α+β – rat<br />
-
**[[3gys]], [[3gqp]], [[3d4x]], [[3gqr]] - Hb α+β– cat<br />
+
**[[3gys]], [[3gqp]], [[3d4x]], [[3gqr]] - Hb α+β – cat<br />
**[[3gdj]] - Hb α+β – camel<br />
**[[3gdj]] - Hb α+β – camel<br />
**[[3eu1]], [[3d1a]] - gHb α+β – goat<br />
**[[3eu1]], [[3d1a]] - gHb α+β – goat<br />
**[[3cy5]] - Hb α+β – buffalo<br />
**[[3cy5]] - Hb α+β – buffalo<br />
 +
**[[3vre]], [[3vrg]] - maHb α+β – mammoth<br />
**[[2zlt]], [[2zlu]], [[2zlv]], [[2zlw]], [[2zlx]], [[1y8h]], [[1y8i]], [[1y8k]], [[1ns6]], [[1ibe]], [[2dhb]] - hoHb α+β – horse<br />
**[[2zlt]], [[2zlu]], [[2zlv]], [[2zlw]], [[2zlx]], [[1y8h]], [[1y8i]], [[1y8k]], [[1ns6]], [[1ibe]], [[2dhb]] - hoHb α+β – horse<br />
-
**[[3k8b]] - tHb α+β<br />
+
**[[1s0h]] - Hb α+β – donkey<br />
 +
**[[1fhj]] - Hb α+β – wolf<br />
 +
**[[2b7h]] - Hb α+β - crab-eating fox<br />
 +
**[[4yu4]], [[4yu3]] - Hb α+β - mongoose<br />
 +
**[[3hrw]] - mHb α+β – mouse<br />
 +
**[[5ker]], [[4h2l]] - Hb α+β - deer mouse<br />
 +
**[[3k8b]] - tHb α+β - turkey<br />
**[[3eok]] - Hb α+β – duck<br />
**[[3eok]] - Hb α+β – duck<br />
**[[2zfb]] - Hb α+β - parrot<br />
**[[2zfb]] - Hb α+β - parrot<br />
**[[3a59]] - osHb α+β – ostrich<br />
**[[3a59]] - osHb α+β – ostrich<br />
-
**[[3hrw]] - mHb α+β – mouse<br />
+
**[[3mjp]] - Hb α+β - Japanese quail<br />
 +
**[[3mju]] - pHb α+β - pigeon<br />
 +
**[[1hv4]] - bgHb α+β – Bar-headed goose<br />
 +
**[[1hbr]] - cHb α+β D – chicken<br />
 +
**[[3wr1]] - Hb α+β - cormorant<br />
**[[3bom]] - trHb α+β - trout<br />
**[[3bom]] - trHb α+β - trout<br />
-
**[[1out]] -trHb α+β (mutant)<br />
+
**[[1out]] - trHb α+β (mutant)<br />
**[[2peg]], [[2h8d]], [[2h8f]], [[1s5x]], [[1s5y]], [[1hbh]] - ErHb α+β - Emerald rockcod<br />
**[[2peg]], [[2h8d]], [[2h8f]], [[1s5x]], [[1s5y]], [[1hbh]] - ErHb α+β - Emerald rockcod<br />
-
**[[2c0k]] - Hb α+β – botfly<br />
+
**[[3mkb]] – Hb α+β – Mako shark<br />
-
**[[1s0h]] - Hb α+β – donkey<br />
+
-
**[[1wmu]], [[1v75]] - GgHb α+βD- Geochelone gigantean<br />
+
-
**[[1v4w]], [[1v4x]] - BtHb α+β - Bluefin tuna<br />
+
**[[1it2]] - haHb α+β - hagfish<br />
**[[1it2]] - haHb α+β - hagfish<br />
-
**[[1fhj]] - Hb α+β – wolf<br />
+
**[[1v4w]], [[1v4x]] - btHb α+β - Bluefin tuna<br />
-
**[[1hv4]] - BgHb α+β – Bar-headed goose<br />
+
**[[1cg5]] - rsHb α+β – Red stingray<br />
-
**[[1cg5]] - RsHb α+β – Red stingray<br />
+
**[[2c0k]] - Hb α+β – botfly<br />
-
**[[1hbr]] - cHb α+β D – chicken<br />
+
**[[3lhb]], [[1f5o]], [[1uc3]] - slHb α+β – Sea lamprey<br />
-
**[[3lhb]], [[1f5o]], [[1uc3]] - SlHb α+β – Sea lamprey<br />
+
-
**[[1hds]] - Hb α+β S – white-tail deer<br />
+
-
**[[2b7h]] - Hb α+β - crab-eating fox<br />
+
-
**[[3lqd]] - Hb α+β - European hare<br />
+
**[[3at5]], [[3at6]] – Hb α+β – ''Podocnemis unifilis''<br />
**[[3at5]], [[3at6]] – Hb α+β – ''Podocnemis unifilis''<br />
-
**[[3vre]], [[3vrg]] - maHb α+β – mammoth<br />
+
**[[1wmu]], [[1v75]] - GgHb α+βD- ''Geochelone gigantean''<br />
-
**[[3wr1]] - Hb α+β - cormorant<br />
+
**[[3ng6]], [[3nfe]], [[2aa1]] - TnHb α+β ''Trematomus newnesi''<br />
-
**[[3pi8]], [[3pi9]], [[3pia]], [[2qsp]], [[2qss]], [[1hda]] - bHb α+β - bovine<br />
+
*Hemoglobin α subunit + β subunit complex
*Hemoglobin α subunit + β subunit complex
Line 74: Line 74:
**[[1b86]], [[3wcp]] - hHb α+β + phosphoglycerate<br />
**[[1b86]], [[3wcp]] - hHb α+β + phosphoglycerate<br />
**[[3bev]] – cHb α + MHC I + β-microglobulin<br />
**[[3bev]] – cHb α + MHC I + β-microglobulin<br />
 +
*Hb  
*Hb  
Line 101: Line 102:
*Hemoglobin
*Hemoglobin
-
**[[2ksc]], 1mwb – Hb – ''Synechococcus'' – NMR<br />
+
**[[3wtg]] - Hb – emu<br />
 +
**[[3ogb]], [[2w6x]], [[2w6y]] – SwHb (mutant) – Sperm whale<br />
 +
**[[2bk9]] – DmHb - ''Drosophila melanogaster''<br />
**[[2r50]] - Hb – corn<br />
**[[2r50]] - Hb – corn<br />
-
**[[2zwj]], [[1x3k]], [[3arj]], [[3ark]], [[3arl]] - TaHb V – ''Tokunagayusurika akamusi''<br />
 
-
**[[1x46]] – TaHb VII<br />
 
-
**[[3ogb]], [[2w6x]], [[2w6y]] – SwHb (mutant) – Sperm whale<br />
 
-
**[[3lb1]], [[3lb2]], [[3lb3]], [[3lb4]] – dehaloperoxidase AoHb+inhibitor – ''Amphitrite ornate''<br />
 
-
**[[3k3u]] - dehaloperoxidase AoHb (mutant)<br />
 
-
**[[2xyk]] – 2-on-2 Hb – ''Agrobacterium tumefaciens''<br />
 
-
**[[2hz1]], [[1rtx]] – SyHb – ''Synechocystis''<br />
 
-
**[[2hz3]] – SyHb (mutant)<br />
 
**[[2gnv]], [[2gnw]] – rHb (mutant) – rice<br />
**[[2gnv]], [[2gnw]] – rHb (mutant) – rice<br />
**[[1d8u]] – rHb<br />
**[[1d8u]] – rHb<br />
 +
**[[3qqq]] – Hb non-symbiotic – Poison peach<br />
**[[2bmm]] – TfHb – ''Thermobifida fusca''<br />
**[[2bmm]] – TfHb – ''Thermobifida fusca''<br />
**[[4uzv]] – TfHb (mutant)<br />
**[[4uzv]] – TfHb (mutant)<br />
-
**[[2bk9]] – DmHb - ''Drosophila melanogaster''<br />
 
**[[1kfr]], [[1h97]] – Hb – ''Paramphistomum epiclitum''<br />
**[[1kfr]], [[1h97]] – Hb – ''Paramphistomum epiclitum''<br />
**[[1gcv]] – MgHb - ''Mustelus griseus''<br />
**[[1gcv]] – MgHb - ''Mustelus griseus''<br />
Line 122: Line 117:
**[[1hlb]], [[1hlm]] – Hb – ''Caudina arenicola''<br />
**[[1hlb]], [[1hlm]] – Hb – ''Caudina arenicola''<br />
**[[2hbg]] - GdHb – ''Glycera dibranchiata''<br />
**[[2hbg]] - GdHb – ''Glycera dibranchiata''<br />
-
**[[3qqq]] – Hb non-symbiotic – Poison peach<br />
 
**[[3qqr]] – Hb non-legume – ''Parasponia andersonii'' <br />
**[[3qqr]] – Hb non-legume – ''Parasponia andersonii'' <br />
**[[4bja]] - Hb – ''Caenorhabditis elegans''<br />
**[[4bja]] - Hb – ''Caenorhabditis elegans''<br />
-
**[[3wtg]] - Hb – emu<br />
+
**[[2ksc]], 1mwb – Hb – ''Synechococcus'' – NMR<br />
 +
**[[2zwj]], [[1x3k]], [[3arj]], [[3ark]], [[3arl]] - TaHb V – ''Tokunagayusurika akamusi''<br />
 +
**[[1x46]] – TaHb VII<br />
 +
**[[3lb1]], [[3lb2]], [[3lb3]], [[3lb4]] – dehaloperoxidase AoHb+inhibitor – ''Amphitrite ornate''<br />
 +
**[[3k3u]] - dehaloperoxidase AoHb (mutant)<br />
 +
**[[2xyk]] – 2-on-2 Hb – ''Agrobacterium tumefaciens''<br />
 +
**[[2hz1]], [[1rtx]] – SyHb – ''Synechocystis''<br />
 +
**[[2hz3]] – SyHb (mutant)<br />
*Mini hemoglobin
*Mini hemoglobin
Line 135: Line 136:
*Giant hemoglobin
*Giant hemoglobin
-
**[[1x9f]] – GiHb+CO – ''Lumbricus terrestris''<br />
+
**[[1x9f]] – GiHb+CO – worm<br />
**[[2zs0]], [[2zs1]], [[2zfo]], [[2d2m]], [[2d2n]] – GiHb+O2 – Beard worm<br />
**[[2zs0]], [[2zs1]], [[2zfo]], [[2d2m]], [[2d2n]] – GiHb+O2 – Beard worm<br />
**[[1yhu]] – GiHb+O2 – Tube worm<br />
**[[1yhu]] – GiHb+O2 – Tube worm<br />
Line 147: Line 148:
**[[5ab8]] - MtTrHb - ''Mycobacterium tuberculosis''<br />
**[[5ab8]] - MtTrHb - ''Mycobacterium tuberculosis''<br />
**[[1idr]] – MtTrHb + O2 <br />
**[[1idr]] – MtTrHb + O2 <br />
 +
**[[1rte]], [[1s56]] – MtTrHb + CN<br />
 +
**[[1s61]] – MtTrHb+ butyl-isocyanide<br />
**[[2ig3]] – TrHb III +CN – ''Campylobacter jejuni''<br />
**[[2ig3]] – TrHb III +CN – ''Campylobacter jejuni''<br />
**[[1ux8]] – TrHb+CN – ''Bacillus subtilis''<br />
**[[1ux8]] – TrHb+CN – ''Bacillus subtilis''<br />
**[[5v3t]] - BaTrHb+CN – ''Bacillus anthracis''<br />
**[[5v3t]] - BaTrHb+CN – ''Bacillus anthracis''<br />
**[[5v3u]], [[5v3v]] – BaTrHb (mutant) +CN <br />
**[[5v3u]], [[5v3v]] – BaTrHb (mutant) +CN <br />
-
**[[1rte]], [[1s56]] – MtTrHb + CN<br />
 
-
**[[1s61]] – MtTrHb+ butyl-isocyanide<br />
 
**[[1uvx]], [[1uvy]] – TrHb + CN – ''Chlamydomonas moewusii''<br />
**[[1uvx]], [[1uvy]] – TrHb + CN – ''Chlamydomonas moewusii''<br />
**[[6cii]] - CrTrHb + CN – ''Chlamydomonas reinhardtii''<br />
**[[6cii]] - CrTrHb + CN – ''Chlamydomonas reinhardtii''<br />
**[[6bme]], [[4xdi]] - CrTrHb 4<br />
**[[6bme]], [[4xdi]] - CrTrHb 4<br />
-
**[[3aq5]] – TpHb+ O2 – ''Tetrahymena pyriformis''<br />
+
**[[3aq5]] – TpTrHb+ O2 – ''Tetrahymena pyriformis''<br />
-
**[[3aq6]] – TpHb III<br />
+
**[[3aq6]] – TpTrHb III<br />
**[[3aq7]], [[3aq8]] - TpHb III (mutant)<br />
**[[3aq7]], [[3aq8]] - TpHb III (mutant)<br />
**[[4c44]], [[4c0n]] - TrHb – ''Arabidopsis thaliana''<br />
**[[4c44]], [[4c0n]] - TrHb – ''Arabidopsis thaliana''<br />
Line 163: Line 164:
*Methemoglobin α subunit + β subunit
*Methemoglobin α subunit + β subunit
-
**[[3gqg]] - roMetHb α+β<br />
+
**[[1jy7]], [[1bz1]] - hMetHb α+β<br />
 +
**[[1vwt]] - hMetHb α+β (mutant)<br />
 +
**[[4xs0]] - hMetHb α+β + ISDH<br />
 +
**[[1ns9]], [[2mhb]] - hoMetHb α+β<br />
 +
**[[2qu0]] - MetHb α+β – sheep<br />
 +
**[[2pgh]] - piMetHb α+β - pig<br />
**[[3dhr]] - pMetHb α+β<br />
**[[3dhr]] - pMetHb α+β<br />
 +
**[[1c40]] - bgMetHb α+β<br />
**[[3hf4]] - rMetHb α+β<br />
**[[3hf4]] - rMetHb α+β<br />
**[[2ri4]] - gMetHb α+β<br />
**[[2ri4]] - gMetHb α+β<br />
 +
**[[3gqg]] - roMetHb α+β<br />
**[[2r1h]] - trMetHb α+β<br />
**[[2r1h]] - trMetHb α+β<br />
-
**[[1ns9]], [[2mhb]] - hoMetHb α+β<br />
 
-
**[[2qu0]] - MetHb α+β – sheep<br />
 
-
**[[2pgh]] - MetHb α+β - pig<br />
 
-
**[[3bj1]], [[3bj2]], [[3bj3]], [[1xq5]] - MetHb α+β – yellow perch<br />
 
-
**[[2hz2]] – SyMetHb (mutant)<br />
 
**[[1dtm]], [[1duo]] - SwMdetHb (mutant) + methylimidazole<br />
**[[1dtm]], [[1duo]] - SwMdetHb (mutant) + methylimidazole<br />
**[[1duk]] - SwMdetHb<br />
**[[1duk]] - SwMdetHb<br />
-
**[[1jy7]], [[1bz1]] - hMetHb α+β<br />
+
**[[3bj1]], [[3bj2]], [[3bj3]], [[1xq5]] - MetHb α+β – yellow perch<br />
-
**[[1vwt]] - hMetHb α+β (mutant)<br />
+
**[[2hz2]] – SyMetHb (mutant)<br />
-
**[[4xs0]] - hMetHb α+β + ISDH<br />
+
-
**[[1c40]] - BgMetHb α+β<br />
+
**[[1moh]] - LpMetHb + H2S - ''Lucina pectinata''<br />
**[[1moh]] - LpMetHb + H2S - ''Lucina pectinata''<br />
**[[1flp]], [[3pi1]], [[3pi2]], [[3pi3]], [[3pi4]] – LpMetHb<br />
**[[1flp]], [[3pi1]], [[3pi2]], [[3pi3]], [[3pi4]] – LpMetHb<br />

Revision as of 10:40, 24 July 2019

Updated on 24-July-2019 - For a general description of the protein see Hemoglobin


Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Jaime Prilusky, Joel L. Sussman

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