2opc

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[[Image:2opc.gif|left|200px]]
[[Image:2opc.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 2opc |SIZE=350|CAPTION= <scene name='initialview01'>2opc</scene>, resolution 1.43&Aring;
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The line below this paragraph, containing "STRUCTURE_2opc", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY=
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|GENE= AvrL567-A ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5261 Melampsora lini])
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|DOMAIN=
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{{STRUCTURE_2opc| PDB=2opc | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2opc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2opc OCA], [http://www.ebi.ac.uk/pdbsum/2opc PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2opc RCSB]</span>
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'''Structure of Melampsora lini avirulence protein, AvrL567-A'''
'''Structure of Melampsora lini avirulence protein, AvrL567-A'''
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[[Category: Teh, T.]]
[[Category: Teh, T.]]
[[Category: Wang, C I.]]
[[Category: Wang, C I.]]
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[[Category: avrl567-a]]
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[[Category: Avrl567-a]]
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[[Category: cobalt]]
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[[Category: Cobalt]]
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[[Category: crystallization]]
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[[Category: Crystallization]]
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[[Category: plant disease resistance]]
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[[Category: Plant disease resistance]]
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[[Category: single-wavelength anomalous dispersion (sad)]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 11:22:53 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:21:08 2008''
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Revision as of 08:22, 4 May 2008

Template:STRUCTURE 2opc

Structure of Melampsora lini avirulence protein, AvrL567-A


Overview

Metal-binding sites are ubiquitous in proteins and can be readily utilized for phasing. It is shown that a protein crystal structure can be solved using single-wavelength anomalous diffraction based on the anomalous signal of a cobalt ion measured on a conventional monochromatic X-ray source. The unique absorption edge of cobalt (1.61 A) is compatible with the Cu K alpha wavelength (1.54 A) commonly available in macromolecular crystallography laboratories. This approach was applied to the determination of the structure of Melampsora lini avirulence protein AvrL567-A, a protein with a novel fold from the fungal pathogen flax rust that induces plant disease resistance in flax plants. This approach using cobalt ions may be applicable to all cobalt-binding proteins and may be advantageous when synchrotron radiation is not readily available.

About this Structure

2OPC is a Single protein structure of sequence from Melampsora lini. Full crystallographic information is available from OCA.

Reference

The use of Co2+ for crystallization and structure determination, using a conventional monochromatic X-ray source, of flax rust avirulence protein., Guncar G, Wang CI, Forwood JK, Teh T, Catanzariti AM, Ellis JG, Dodds PN, Kobe B, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Mar 1;63(Pt, 3):209-13. Epub 2007 Feb 23. PMID:17329816 Page seeded by OCA on Sun May 4 11:22:53 2008

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