We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.
2oxr
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==PAB0955 crystal structure : a GTPase in GDP and Mg bound form from Pyrococcus abyssi (after GTP hydrolysis)== | ==PAB0955 crystal structure : a GTPase in GDP and Mg bound form from Pyrococcus abyssi (after GTP hydrolysis)== | ||
| - | <StructureSection load='2oxr' size='340' side='right' caption='[[2oxr]], [[Resolution|resolution]] 2.40Å' scene=''> | + | <StructureSection load='2oxr' size='340' side='right'caption='[[2oxr]], [[Resolution|resolution]] 2.40Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2oxr]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2oxr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"pyrococcus_abyssi"_erauso_et_al._1993 "pyrococcus abyssi" erauso et al. 1993]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OXR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OXR FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1yrb|1yrb]], [[1yra|1yra]], [[1yr9|1yr9]], [[1yr8|1yr8]], [[1yr7|1yr7]], [[1yr6|1yr6]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1yrb|1yrb]], [[1yra|1yra]], [[1yr9|1yr9]], [[1yr8|1yr8]], [[1yr7|1yr7]], [[1yr6|1yr6]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pab0955 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pab0955 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29292 "Pyrococcus abyssi" Erauso et al. 1993])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oxr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oxr OCA], [https://pdbe.org/2oxr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oxr RCSB], [https://www.ebi.ac.uk/pdbsum/2oxr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oxr ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 30: | Line 30: | ||
==See Also== | ==See Also== | ||
| - | *[[GTP-binding protein|GTP-binding protein]] | + | *[[GTP-binding protein 3D structures|GTP-binding protein 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
| Line 36: | Line 36: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Pyrococcus abyssi erauso et al. 1993]] | [[Category: Pyrococcus abyssi erauso et al. 1993]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Armengaud, J]] | [[Category: Armengaud, J]] | ||
[[Category: Carpentier, P]] | [[Category: Carpentier, P]] | ||
Revision as of 13:08, 9 June 2021
PAB0955 crystal structure : a GTPase in GDP and Mg bound form from Pyrococcus abyssi (after GTP hydrolysis)
| |||||||||||

