6aek
From Proteopedia
(Difference between revisions)
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- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of ENPP1 in complex with pApG== | |
+ | <StructureSection load='6aek' size='340' side='right' caption='[[6aek]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[6aek]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AEK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6AEK FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6aek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6aek OCA], [http://pdbe.org/6aek PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6aek RCSB], [http://www.ebi.ac.uk/pdbsum/6aek PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6aek ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | ENPP1 (Ecto-nucleotide pyrophosphatase phosphodiesterase 1), a type II transmembrane glycoprotein, hydrolyzes ATP to produce AMP and diphosphate, thereby inhibiting bone mineralization. A recent study showed that ENPP1 also preferentially hydrolyzes 2'3'-cGAMP (cyclic GMP-AMP) but not its linkage isomer 3'3'-cGAMP, and negatively regulates the cGAS-STING pathway in the innate immune system. Here, we present the high-resolution crystal structures of ENPP1 in complex with 3'3'-cGAMP and the reaction intermediate pA(3',5')pG. The structures revealed that the adenine and guanine bases of the dinucleotides are recognized by nucleotide- and guanine-pockets, respectively. Furthermore, the structures indicate that 2'3'-cGAMP, but not 3'3'-cGAMP, binds to the active site in a conformation suitable for catalysis, thereby explaining the specific degradation of 2'3'-cGAMP by ENPP1. Our findings provide insights into how ENPP1 hydrolyzes both ATP and cGAMP to participate in the two distinct biological processes. | ||
- | + | Structural insights into cGAMP degradation by Ecto-nucleotide pyrophosphatase phosphodiesterase 1.,Kato K, Nishimasu H, Oikawa D, Hirano S, Hirano H, Kasuya G, Ishitani R, Tokunaga F, Nureki O Nat Commun. 2018 Oct 24;9(1):4424. doi: 10.1038/s41467-018-06922-7. PMID:30356045<ref>PMID:30356045</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | <div class="pdbe-citations 6aek" style="background-color:#fffaf0;"></div> | |
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
[[Category: Hirano, H]] | [[Category: Hirano, H]] | ||
[[Category: Hirano, S]] | [[Category: Hirano, S]] | ||
+ | [[Category: Ishitani, R]] | ||
[[Category: Kato, K]] | [[Category: Kato, K]] | ||
[[Category: Nishimasu, H]] | [[Category: Nishimasu, H]] | ||
- | [[Category: | + | [[Category: Nureki, O]] |
+ | [[Category: Cgamp]] | ||
+ | [[Category: Cgas-sting]] | ||
+ | [[Category: Cyclic gmp-amp]] | ||
+ | [[Category: Enzyme]] | ||
+ | [[Category: Immunosuppressant]] | ||
+ | [[Category: Phoshodiesterase]] |
Revision as of 07:24, 6 March 2019
Crystal structure of ENPP1 in complex with pApG
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Categories: Hirano, H | Hirano, S | Ishitani, R | Kato, K | Nishimasu, H | Nureki, O | Cgamp | Cgas-sting | Cyclic gmp-amp | Enzyme | Immunosuppressant | Phoshodiesterase