2qm7

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[[Image:2qm7.jpg|left|200px]]
[[Image:2qm7.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 2qm7 |SIZE=350|CAPTION= <scene name='initialview01'>2qm7</scene>, resolution 1.85&Aring;
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The line below this paragraph, containing "STRUCTURE_2qm7", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=AC1:Po4+Binding+Site+For+Residue+A+500'>AC1</scene>, <scene name='pdbsite=AC2:Po4+Binding+Site+For+Residue+A+501'>AC2</scene>, <scene name='pdbsite=AC3:Gdp+Binding+Site+For+Residue+A+601'>AC3</scene> and <scene name='pdbsite=AC4:Gdp+Binding+Site+For+Residue+B+602'>AC4</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=GDP:GUANOSINE-5&#39;-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY=
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or leave the SCENE parameter empty for the default display.
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|GENE= meaB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=500 Thermomicrobium roseum])
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|DOMAIN=
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{{STRUCTURE_2qm7| PDB=2qm7 | SCENE= }}
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|RELATEDENTRY=[[2hf8|2HF8]], [[2hf9|2HF9]], [[2qm8|2QM8]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qm7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qm7 OCA], [http://www.ebi.ac.uk/pdbsum/2qm7 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2qm7 RCSB]</span>
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'''MeaB, A Bacterial Homolog of MMAA, Bound to GDP'''
'''MeaB, A Bacterial Homolog of MMAA, Bound to GDP'''
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[[Category: Mahlstedt, S A.]]
[[Category: Mahlstedt, S A.]]
[[Category: Padovani, D.]]
[[Category: Padovani, D.]]
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[[Category: g protein]]
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[[Category: G protein]]
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[[Category: g3e]]
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[[Category: G3e]]
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[[Category: gtpase]]
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[[Category: Gtpase]]
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[[Category: metallochaperone]]
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[[Category: Metallochaperone]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 15:11:34 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:50:46 2008''
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Revision as of 12:11, 4 May 2008

Template:STRUCTURE 2qm7

MeaB, A Bacterial Homolog of MMAA, Bound to GDP


Overview

MeaB is an auxiliary protein that plays a crucial role in the protection and assembly of the B(12)-dependent enzyme methylmalonyl-CoA mutase. Impairments in the human homologue of MeaB, MMAA, lead to methylmalonic aciduria, an inborn error of metabolism. To explore the role of this metallochaperone, its structure was solved in the nucleotide-free form, as well as in the presence of product, GDP. MeaB is a homodimer, with each subunit containing a central alpha/beta-core G domain that is typical of the GTPase family, as well as alpha-helical extensions at the N and C termini that are not found in other metalloenzyme chaperone GTPases. The C-terminal extension appears to be essential for nucleotide-independent dimerization, and the N-terminal region is implicated in protein-protein interaction with its partner protein, methylmalonyl-CoA mutase. The structure of MeaB confirms that it is a member of the G3E family of P-loop GTPases, which contains other putative metallochaperones HypB, CooC, and UreG. Interestingly, the so-called switch regions, responsible for signal transduction following GTP hydrolysis, are found at the dimer interface of MeaB instead of being positioned at the surface of the protein where its partner protein methylmalonyl-CoA mutase should bind. This observation suggests a large conformation change of MeaB must occur between the GDP- and GTP-bound forms of this protein. Because of their high sequence homology, the missense mutations in MMAA that result in methylmalonic aciduria have been mapped onto MeaB and, in conjunction with mutagenesis data, provide possible explanations for the pathology of this disease.

About this Structure

2QM7 is a Single protein structure of sequence from Thermomicrobium roseum. Full crystallographic information is available from OCA.

Reference

Crystal structure and mutagenesis of the metallochaperone MeaB: insight into the causes of methylmalonic aciduria., Hubbard PA, Padovani D, Labunska T, Mahlstedt SA, Banerjee R, Drennan CL, J Biol Chem. 2007 Oct 26;282(43):31308-16. Epub 2007 Aug 28. PMID:17728257 Page seeded by OCA on Sun May 4 15:11:34 2008

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