2r5o

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2r5o.jpg|left|200px]]
[[Image:2r5o.jpg|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2r5o |SIZE=350|CAPTION= <scene name='initialview01'>2r5o</scene>, resolution 1.300&Aring;
+
The line below this paragraph, containing "STRUCTURE_2r5o", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE= ORF431 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
+
-->
-
|DOMAIN=
+
{{STRUCTURE_2r5o| PDB=2r5o | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2r5o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r5o OCA], [http://www.ebi.ac.uk/pdbsum/2r5o PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2r5o RCSB]</span>
+
-
}}
+
'''Crystal structure of the C-terminal domain of wzt'''
'''Crystal structure of the C-terminal domain of wzt'''
Line 28: Line 25:
[[Category: Kimber, M S.]]
[[Category: Kimber, M S.]]
[[Category: Whitfield, C.]]
[[Category: Whitfield, C.]]
-
[[Category: abc transporter]]
+
[[Category: Abc transporter]]
-
[[Category: atp-binding]]
+
[[Category: Atp-binding]]
-
[[Category: carbohydrate binding]]
+
[[Category: Carbohydrate binding]]
-
[[Category: domain swapping]]
+
[[Category: Domain swapping]]
-
[[Category: immunoglobulin fold]]
+
[[Category: Immunoglobulin fold]]
-
[[Category: nucleotide-binding]]
+
[[Category: Nucleotide-binding]]
-
[[Category: o antigen export]]
+
[[Category: O antigen export]]
-
[[Category: transport protein]]
+
[[Category: Transport protein]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 16:17:34 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:56:49 2008''
+

Revision as of 13:17, 4 May 2008

Template:STRUCTURE 2r5o

Crystal structure of the C-terminal domain of wzt


Overview

ATP-binding-cassette (ABC) transporters are responsible for the export of a wide variety of cell-surface glycoconjugates in both Gram-positive and Gram-negative bacteria. These include the O-antigenic polysaccharide (O-PS) portion of lipopolysaccharide, a crucial virulence determinant in Gram-negative pathogens. O-PSs are synthesized by one of two fundamentally different pathways. Escherichia coli O serotypes O8 and O9a provide the prototype systems for studying O-PS export via ABC transporters. The transporter is composed of the transmembrane component Wzm and the nucleotide-binding component Wzt. Although the N-terminal domain of Wzt is a conventional ABC protein, the C-terminal domain of Wzt (C-Wzt) is a unique structural element that determines the specificity of the transporter for either the O8 or O9a O-PS. We show here that the two domains of Wzt can function when expressed as separate polypeptides; both are essential for export. In vitro, C-Wzt binds its cognate O-PS by recognizing a residue located at the nonreducing end of the polymer. The crystal structure of C-Wzt(O9a) is reported here and reveals a beta sandwich with an immunoglobulin-like topology that contains the O-PS-binding pocket. Substrate interactions with nucleotide-binding domains have been demonstrated in an ABC exporter previously. However, to our knowledge substrate binding by a discrete, cytoplasmic accessory domain in an extended nucleotide-binding domain polypeptide has not previously been demonstrated. Elucidation of the substrate-recognition system involved in O-PS export provides insight into the mechanism that coordinates polymer biosynthesis, termination, and export.

About this Structure

2R5O is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.

Reference

Substrate binding by a bacterial ABC transporter involved in polysaccharide export., Cuthbertson L, Kimber MS, Whitfield C, Proc Natl Acad Sci U S A. 2007 Dec 4;104(49):19529-34. Epub 2007 Nov 21. PMID:18032609 Page seeded by OCA on Sun May 4 16:17:34 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools