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2z6b
From Proteopedia
(Difference between revisions)
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==Crystal Structure Analysis of (gp27-gp5)3 conjugated with Fe(III) protoporphyrin== | ==Crystal Structure Analysis of (gp27-gp5)3 conjugated with Fe(III) protoporphyrin== | ||
| - | <StructureSection load='2z6b' size='340' side='right' caption='[[2z6b]], [[Resolution|resolution]] 3.11Å' scene=''> | + | <StructureSection load='2z6b' size='340' side='right'caption='[[2z6b]], [[Resolution|resolution]] 3.11Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2z6b]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2z6b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bpt4 Bpt4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z6B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z6B FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NEN:1-ETHYL-PYRROLIDINE-2,5-DIONE'>NEN</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NEN:1-ETHYL-PYRROLIDINE-2,5-DIONE'>NEN</scene></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">5 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">5 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10665 BPT4]), 27 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10665 BPT4])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z6b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z6b OCA], [https://pdbe.org/2z6b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z6b RCSB], [https://www.ebi.ac.uk/pdbsum/2z6b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z6b ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/VG05_BPT4 VG05_BPT4]] Tail-associated lysozyme essential for localized hydrolysis of bacterial cell wall necessary for viral DNA injection. The needle-like gp5 protein punctures the outer cell membrane and then digests the peptidoglycan cell wall in the periplasmic space. [[https://www.uniprot.org/uniprot/VG27_BPT4 VG27_BPT4]] Structural component of the baseplate. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Bpt4]] | [[Category: Bpt4]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Lysozyme]] | [[Category: Lysozyme]] | ||
[[Category: Arisaka, F]] | [[Category: Arisaka, F]] | ||
Revision as of 07:12, 10 November 2021
Crystal Structure Analysis of (gp27-gp5)3 conjugated with Fe(III) protoporphyrin
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Categories: Bpt4 | Large Structures | Lysozyme | Arisaka, F | Kanamaru, S | Koshiyama, T | Nagano, S | Shiro, Y | Ueno, T | Watanabe, Y | Yokoi, N | Antimicrobial | Bacteriolytic enzyme | Glycosidase | Hydrolase | Hydrolase-structural protein complex | Late protein | Protein containing metal complex | Virion
