2zg3
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
==Crystal Structure of Two N-terminal Domains of Native Siglec-5 in Complex with 3'-Sialyllactose== | ==Crystal Structure of Two N-terminal Domains of Native Siglec-5 in Complex with 3'-Sialyllactose== | ||
- | <StructureSection load='2zg3' size='340' side='right' caption='[[2zg3]], [[Resolution|resolution]] 3.00Å' scene=''> | + | <StructureSection load='2zg3' size='340' side='right'caption='[[2zg3]], [[Resolution|resolution]] 3.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2zg3]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2zg3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZG3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZG3 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1o7s|1o7s]], [[1qfo|1qfo]], [[2zg1|2zg1]], [[2zg2|2zg2]]</td></tr> | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SIGLEC5 ([ | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1o7s|1o7s]], [[1qfo|1qfo]], [[2zg1|2zg1]], [[2zg2|2zg2]]</div></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SIGLEC5 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zg3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zg3 OCA], [https://pdbe.org/2zg3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zg3 RCSB], [https://www.ebi.ac.uk/pdbsum/2zg3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zg3 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/SIGL5_HUMAN SIGL5_HUMAN]] Putative adhesion molecule that mediates sialic-acid dependent binding to cells. Binds equally to alpha-2,3-linked and alpha-2,6-linked sialic acid. The sialic acid recognition site may be masked by cis interactions with sialic acids on the same cell surface. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Line 35: | Line 36: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Human]] | [[Category: Human]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Sun, P D]] | [[Category: Sun, P D]] | ||
[[Category: Zhuravleva, M A]] | [[Category: Zhuravleva, M A]] |
Revision as of 10:52, 8 December 2021
Crystal Structure of Two N-terminal Domains of Native Siglec-5 in Complex with 3'-Sialyllactose
|
Categories: Human | Large Structures | Sun, P D | Zhuravleva, M A | 3'-sialyllactose complex | C2-set | Cell adhesion | Glycoprotein | Ig-like domain | Immune system-carbohydrate binding protein complex | Immunoglobulin domain | Lectin | Membrane | Polymorphism | Sialic acid | Siglec-5 inhibitory receptor | Transmembrane | Two-domain structure | V-set