2rmk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:2rmk.jpg|left|200px]]
[[Image:2rmk.jpg|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 2rmk |SIZE=350|CAPTION= <scene name='initialview01'>2rmk</scene>
+
The line below this paragraph, containing "STRUCTURE_2rmk", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=GCP:PHOSPHOMETHYLPHOSPHONIC+ACID+GUANYLATE+ESTER'>GCP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein_kinase_C Protein kinase C], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.13 2.7.11.13] </span>
+
or leave the SCENE parameter empty for the default display.
-
|GENE= RAC1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]), PKN1, PKN, PRK1, PRKCL1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
+
-->
-
|DOMAIN=
+
{{STRUCTURE_2rmk| PDB=2rmk | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rmk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rmk OCA], [http://www.ebi.ac.uk/pdbsum/2rmk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2rmk RCSB]</span>
+
-
}}
+
'''Rac1/PRK1 Complex'''
'''Rac1/PRK1 Complex'''
Line 32: Line 29:
[[Category: Nietlispach, D.]]
[[Category: Nietlispach, D.]]
[[Category: Owen, D.]]
[[Category: Owen, D.]]
-
[[Category: adp-ribosylation]]
+
[[Category: Adp-ribosylation]]
-
[[Category: alternative splicing]]
+
[[Category: Alternative splicing]]
-
[[Category: atp-binding]]
+
[[Category: Atp-binding]]
-
[[Category: cytoplasm]]
+
[[Category: Cytoplasm]]
-
[[Category: effector]]
+
[[Category: Effector]]
-
[[Category: g protein]]
+
[[Category: G protein]]
-
[[Category: gtp-binding]]
+
[[Category: Gtp-binding]]
-
[[Category: kinase]]
+
[[Category: Kinase]]
-
[[Category: lipoprotein]]
+
[[Category: Lipoprotein]]
-
[[Category: membrane]]
+
[[Category: Membrane]]
-
[[Category: membrane protein/transferase complex]]
+
[[Category: Membrane protein/transferase complex]]
-
[[Category: methylation]]
+
[[Category: Methylation]]
-
[[Category: nucleotide-binding]]
+
[[Category: Nucleotide-binding]]
-
[[Category: phosphorylation]]
+
[[Category: Phosphorylation]]
-
[[Category: polymorphism]]
+
[[Category: Polymorphism]]
-
[[Category: prenylation]]
+
[[Category: Prenylation]]
-
[[Category: serine/threonine-protein kinase]]
+
[[Category: Serine/threonine-protein kinase]]
-
[[Category: transferase]]
+
[[Category: Transferase]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 17:10:51 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:02:07 2008''
+

Revision as of 14:10, 4 May 2008

Template:STRUCTURE 2rmk

Rac1/PRK1 Complex


Overview

Protein kinase C-related kinase 1 (PRK1 or PKN) is involved in regulation of the intermediate filaments of the actin cytoskeleton, as well as having effects on processes as diverse as mitotic timing and apoptosis. It is activated by interacting with the Rho family small G proteins and arachidonic acid or by caspase cleavage. We have previously shown that the HR1b of PRK1 binds exclusively to Rac1, whereas the HR1a domain binds to both Rac1 and RhoA. Here, we have determined the solution structure of the HR1b-Rac complex. We show that HR1b binds to the C-terminal end of the effector loop and switch 2 of Rac1. Comparison with the HR1a-RhoA structure shows that this part of the Rac1-HR1b interaction is homologous to one of the contact sites that HR1a makes with RhoA. The Rac1 used in this study included the C-terminal polybasic region, which is frequently omitted from structural studies, as well as the core G domain. The Rac1 C-terminal region reverses in direction to interact with residues in switch 2, and the polybasic region itself interacts with residues in HR1b. The interactions with HR1b do not prevent the polybasic region being available to contact the negatively charged membrane phospholipids, which is considered to be its primary role. This is the first structural demonstration that the C terminus of a G protein forms a novel recognition element for effector binding.

About this Structure

2RMK is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.

Reference

The Rac1 polybasic region is required for interaction with its effector PRK1., Modha R, Campbell LJ, Nietlispach D, Buhecha HR, Owen D, Mott HR, J Biol Chem. 2008 Jan 18;283(3):1492-500. Epub 2007 Nov 15. PMID:18006505 Page seeded by OCA on Sun May 4 17:10:51 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools