5ni8

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Current revision (12:59, 15 November 2023) (edit) (undo)
 
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==Ligand complex of RORg LBD==
==Ligand complex of RORg LBD==
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<StructureSection load='5ni8' size='340' side='right' caption='[[5ni8]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
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<StructureSection load='5ni8' size='340' side='right'caption='[[5ni8]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5ni8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NI8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NI8 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5ni8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NI8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5NI8 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8Y2:2-(4-ethylsulfonylphenyl)-~{N}-[4-(2-phenylmethoxypyridin-3-yl)thiophen-2-yl]ethanamide'>8Y2</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RORC, NR1F3, RORG, RZRG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8Y2:2-(4-ethylsulfonylphenyl)-~{N}-[4-(2-phenylmethoxypyridin-3-yl)thiophen-2-yl]ethanamide'>8Y2</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ni8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ni8 OCA], [http://pdbe.org/5ni8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ni8 RCSB], [http://www.ebi.ac.uk/pdbsum/5ni8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ni8 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ni8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ni8 OCA], [https://pdbe.org/5ni8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ni8 RCSB], [https://www.ebi.ac.uk/pdbsum/5ni8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ni8 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/RORG_HUMAN RORG_HUMAN]] Possible nuclear receptor for hydroxycholesterols, the binding of which strongly promotes coactivators recruitment. Essential for thymopoiesis and the development of several secondary lymphoid tissues, including lymph nodes. Involved in lineage specification of uncommitted CD4(+) T-helper cells into Th17 cells. Regulate the expression of several components of the circadian clock.
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[https://www.uniprot.org/uniprot/RORG_HUMAN RORG_HUMAN] Possible nuclear receptor for hydroxycholesterols, the binding of which strongly promotes coactivators recruitment. Essential for thymopoiesis and the development of several secondary lymphoid tissues, including lymph nodes. Involved in lineage specification of uncommitted CD4(+) T-helper cells into Th17 cells. Regulate the expression of several components of the circadian clock.
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<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
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[[Category: Aagaard, A]]
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[[Category: Large Structures]]
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[[Category: Narjes, F]]
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[[Category: Aagaard A]]
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[[Category: Xue, Y]]
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[[Category: Narjes F]]
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[[Category: Rorg ligand]]
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[[Category: Xue Y]]
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[[Category: Structure-based design]]
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[[Category: Transcription]]
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Ligand complex of RORg LBD

PDB ID 5ni8

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