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3ahg
From Proteopedia
(Difference between revisions)
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==H64A mutant of Phosphoketolase from Bifidobacterium Breve complexed with a tricyclic ring form of thiamine diphosphate== | ==H64A mutant of Phosphoketolase from Bifidobacterium Breve complexed with a tricyclic ring form of thiamine diphosphate== | ||
| - | <StructureSection load='3ahg' size='340' side='right' caption='[[3ahg]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='3ahg' size='340' side='right'caption='[[3ahg]], [[Resolution|resolution]] 1.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3ahg]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3ahg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bifidobacterium_parvulorum"_reuter_1963 "bifidobacterium parvulorum" reuter 1963]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AHG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AHG FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HTD:2-[(9AR)-2,7-DIMETHYL-9A,10-DIHYDRO-5H-PYRIMIDO[4,5-D][1,3]THIAZOLO[3,2-A]PYRIMIDIN-8-YL]ETHYL+TRIHYDROGEN+DIPHOSPHATE'>HTD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HTD:2-[(9AR)-2,7-DIMETHYL-9A,10-DIHYDRO-5H-PYRIMIDO[4,5-D][1,3]THIAZOLO[3,2-A]PYRIMIDIN-8-YL]ETHYL+TRIHYDROGEN+DIPHOSPHATE'>HTD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ahc|3ahc]], [[3ahd|3ahd]], [[3ahe|3ahe]], [[3ahf|3ahf]], [[3ahh|3ahh]], [[3ahi|3ahi]], [[3ahj|3ahj]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3ahc|3ahc]], [[3ahd|3ahd]], [[3ahe|3ahe]], [[3ahf|3ahf]], [[3ahh|3ahh]], [[3ahi|3ahi]], [[3ahj|3ahj]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">xfp ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">xfp ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1685 "Bifidobacterium parvulorum" Reuter 1963])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Fructose-6-phosphate_phosphoketolase Fructose-6-phosphate phosphoketolase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.22 4.1.2.22] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ahg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ahg OCA], [https://pdbe.org/3ahg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ahg RCSB], [https://www.ebi.ac.uk/pdbsum/3ahg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ahg ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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[[Category: Bifidobacterium parvulorum reuter 1963]] | [[Category: Bifidobacterium parvulorum reuter 1963]] | ||
[[Category: Fructose-6-phosphate phosphoketolase]] | [[Category: Fructose-6-phosphate phosphoketolase]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Ashida, H]] | [[Category: Ashida, H]] | ||
[[Category: Fushinobu, S]] | [[Category: Fushinobu, S]] | ||
Revision as of 14:52, 29 December 2021
H64A mutant of Phosphoketolase from Bifidobacterium Breve complexed with a tricyclic ring form of thiamine diphosphate
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Categories: Bifidobacterium parvulorum reuter 1963 | Fructose-6-phosphate phosphoketolase | Large Structures | Ashida, H | Fushinobu, S | Katayama, T | Kim, B J | Shoun, H | Suzuki, R | Wakagi, T | Yamamoto, K | Alpha-beta fold | Dihydrothiachromine form of thiamine diphosphate | Homodimer | Lyase | Thiamine diphosphate-dependent enzyme

