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3btp

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==Crystal structure of Agrobacterium tumefaciens VirE2 in complex with its chaperone VirE1: a novel fold and implications for DNA binding==
==Crystal structure of Agrobacterium tumefaciens VirE2 in complex with its chaperone VirE1: a novel fold and implications for DNA binding==
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<StructureSection load='3btp' size='340' side='right' caption='[[3btp]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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<StructureSection load='3btp' size='340' side='right'caption='[[3btp]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3btp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BTP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BTP FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3btp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BTP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BTP FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">virE2, Atu6190, AGR_pTi_28 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC]), virE1, Atu6189, AGR_pTi_26 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">virE2, Atu6190, AGR_pTi_28 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC]), virE1, Atu6189, AGR_pTi_26 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3btp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3btp OCA], [http://pdbe.org/3btp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3btp RCSB], [http://www.ebi.ac.uk/pdbsum/3btp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3btp ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3btp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3btp OCA], [https://pdbe.org/3btp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3btp RCSB], [https://www.ebi.ac.uk/pdbsum/3btp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3btp ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/VIRE2_AGRT5 VIRE2_AGRT5]] Involved in DNA transformation; mediates the nuclear uptake of single-stranded DNA copies of the transferred DNA (T-DNA) element. Binds single-stranded but not double-stranded DNA regardless of nucleotide sequence composition.<ref>PMID:17784072</ref> <ref>PMID:8637884</ref> <ref>PMID:12124400</ref> [[http://www.uniprot.org/uniprot/VIRE1_AGRT5 VIRE1_AGRT5]] Involved in DNA transformation; controls virE2 polymerization and prevents virE2 binding to DNA.
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[[https://www.uniprot.org/uniprot/VIRE2_AGRT5 VIRE2_AGRT5]] Involved in DNA transformation; mediates the nuclear uptake of single-stranded DNA copies of the transferred DNA (T-DNA) element. Binds single-stranded but not double-stranded DNA regardless of nucleotide sequence composition.<ref>PMID:17784072</ref> <ref>PMID:8637884</ref> <ref>PMID:12124400</ref> [[https://www.uniprot.org/uniprot/VIRE1_AGRT5 VIRE1_AGRT5]] Involved in DNA transformation; controls virE2 polymerization and prevents virE2 binding to DNA.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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==See Also==
==See Also==
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*[[DNA-binding protein VirE2 from Agrobacterium tumefaciens complexed with chaperone VirE1|DNA-binding protein VirE2 from Agrobacterium tumefaciens complexed with chaperone VirE1]]
 
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*[[Interactive 3D Complements in Proteopedia|Interactive 3D Complements in Proteopedia]]
 
*[[VirE1-VirE2|VirE1-VirE2]]
*[[VirE1-VirE2|VirE1-VirE2]]
== References ==
== References ==
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</StructureSection>
</StructureSection>
[[Category: Agrfc]]
[[Category: Agrfc]]
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[[Category: Large Structures]]
[[Category: Albeck, S]]
[[Category: Albeck, S]]
[[Category: Dym, O]]
[[Category: Dym, O]]

Revision as of 08:25, 19 January 2022

Crystal structure of Agrobacterium tumefaciens VirE2 in complex with its chaperone VirE1: a novel fold and implications for DNA binding

PDB ID 3btp

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