6fnd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:01, 9 April 2025) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of Toxoplasma gondii AKMT==
==Crystal structure of Toxoplasma gondii AKMT==
-
<StructureSection load='6fnd' size='340' side='right' caption='[[6fnd]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+
<StructureSection load='6fnd' size='340' side='right'caption='[[6fnd]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6fnd]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FND OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6FND FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6fnd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Toxoplasma_gondii Toxoplasma gondii] and [https://en.wikipedia.org/wiki/Toxoplasma_gondii_TgCatPRC2 Toxoplasma gondii TgCatPRC2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FND OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6FND FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.101&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene>, <scene name='pdbligand=MLZ:N-METHYL-LYSINE'>MLZ</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene>, <scene name='pdbligand=MLZ:N-METHYL-LYSINE'>MLZ</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6fnd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fnd OCA], [http://pdbe.org/6fnd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6fnd RCSB], [http://www.ebi.ac.uk/pdbsum/6fnd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6fnd ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6fnd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fnd OCA], [https://pdbe.org/6fnd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6fnd RCSB], [https://www.ebi.ac.uk/pdbsum/6fnd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6fnd ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/B9Q0K5_TOXGV B9Q0K5_TOXGV]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Dong, G]]
+
[[Category: Large Structures]]
-
[[Category: Pivovarova, Y]]
+
[[Category: Toxoplasma gondii]]
-
[[Category: Akmt]]
+
[[Category: Toxoplasma gondii TgCatPRC2]]
-
[[Category: Homodimer]]
+
[[Category: Dong G]]
-
[[Category: Lysine methyltransferase]]
+
[[Category: Pivovarova Y]]
-
[[Category: Set domain]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of Toxoplasma gondii AKMT

PDB ID 6fnd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools