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3dql
From Proteopedia
(Difference between revisions)
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==Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 1: Structure 5 in a Series of 26 High Pressure Structures== | ==Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 1: Structure 5 in a Series of 26 High Pressure Structures== | ||
| - | <StructureSection load='3dql' size='340' side='right' caption='[[3dql]], [[Resolution|resolution]] 1.47Å' scene=''> | + | <StructureSection load='3dql' size='340' side='right'caption='[[3dql]], [[Resolution|resolution]] 1.47Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3dql]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3dql]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeqvi Aeqvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DQL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DQL FirstGlance]. <br> |
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr> | ||
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1huy|1huy]], [[1yfp|1yfp]], [[2yfp|2yfp]], [[1f0b|1f0b]], [[1f09|1f09]], [[3dpw|3dpw]], [[3dpx|3dpx]], [[3dpz|3dpz]], [[3dq1|3dq1]], [[3dq2|3dq2]], [[3dq3|3dq3]], [[3dq4|3dq4]], [[3dq5|3dq5]], [[3dq6|3dq6]], [[3dq7|3dq7]], [[3dq8|3dq8]], [[3dq9|3dq9]], [[3dqa|3dqa]], [[3dqc|3dqc]], [[3dqd|3dqd]], [[3dqe|3dqe]], [[3dqf|3dqf]], [[3dqh|3dqh]], [[3dqi|3dqi]], [[3dqj|3dqj]], [[3dqk|3dqk]], [[3dqm|3dqm]], [[3dqn|3dqn]], [[3dqo|3dqo]], [[3dqu|3dqu]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1huy|1huy]], [[1yfp|1yfp]], [[2yfp|2yfp]], [[1f0b|1f0b]], [[1f09|1f09]], [[3dpw|3dpw]], [[3dpx|3dpx]], [[3dpz|3dpz]], [[3dq1|3dq1]], [[3dq2|3dq2]], [[3dq3|3dq3]], [[3dq4|3dq4]], [[3dq5|3dq5]], [[3dq6|3dq6]], [[3dq7|3dq7]], [[3dq8|3dq8]], [[3dq9|3dq9]], [[3dqa|3dqa]], [[3dqc|3dqc]], [[3dqd|3dqd]], [[3dqe|3dqe]], [[3dqf|3dqf]], [[3dqh|3dqh]], [[3dqi|3dqi]], [[3dqj|3dqj]], [[3dqk|3dqk]], [[3dqm|3dqm]], [[3dqn|3dqn]], [[3dqo|3dqo]], [[3dqu|3dqu]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GFP ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GFP ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6100 AEQVI])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dql FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dql OCA], [https://pdbe.org/3dql PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dql RCSB], [https://www.ebi.ac.uk/pdbsum/3dql PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dql ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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==See Also== | ==See Also== | ||
| - | *[[Green Fluorescent Protein|Green Fluorescent Protein]] | + | *[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Aeqvi]] | [[Category: Aeqvi]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Barstow, B]] | [[Category: Barstow, B]] | ||
[[Category: Kim, C U]] | [[Category: Kim, C U]] | ||
Revision as of 19:27, 20 October 2021
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 1: Structure 5 in a Series of 26 High Pressure Structures
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