This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3dkp
From Proteopedia
| Line 1: | Line 1: | ||
==Human DEAD-box RNA-helicase DDX52, conserved domain I in complex with ADP== | ==Human DEAD-box RNA-helicase DDX52, conserved domain I in complex with ADP== | ||
| - | <StructureSection load='3dkp' size='340' side='right' caption='[[3dkp]], [[Resolution|resolution]] 2.10Å' scene=''> | + | <StructureSection load='3dkp' size='340' side='right'caption='[[3dkp]], [[Resolution|resolution]] 2.10Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3dkp]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3dkp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DKP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DKP FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DDX52, ROK1 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DDX52, ROK1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dkp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dkp OCA], [https://pdbe.org/3dkp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dkp RCSB], [https://www.ebi.ac.uk/pdbsum/3dkp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dkp ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 29: | Line 29: | ||
==See Also== | ==See Also== | ||
| - | *[[Helicase|Helicase]] | + | *[[Helicase 3D structures|Helicase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
| Line 35: | Line 35: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Human]] | [[Category: Human]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Andersson, J]] | [[Category: Andersson, J]] | ||
[[Category: Arrowsmith, C H]] | [[Category: Arrowsmith, C H]] | ||
Revision as of 08:00, 9 February 2022
Human DEAD-box RNA-helicase DDX52, conserved domain I in complex with ADP
| |||||||||||
Categories: Human | Large Structures | Andersson, J | Arrowsmith, C H | Berg, S van den | Berglund, H | Collins, R | Dahlgren, L G | Edwards, A M | Flodin, S | Flores, A | Graslund, S | Hammarstrom, M | Johansson, A | Johansson, I | Karlberg, T | Kotenyova, T | Lehtio, L | Moche, M | Nilsson, M E | Nordlund, P | Nyman, T | Olesen, K | Persson, C | Structural genomic | Sagemark, J | Schueler, H | Thorsell, A G | Tresaugues, L | Welin, M | Wikstrom, M | Wisniewska, M | Adp | Atp-binding | Dead | Hydrolase | Nucleotide-binding | Nucleus | Phosphoprotein | Rna helicase | Rna-binding | Rrna | Sgc

