3fy5
From Proteopedia
(Difference between revisions)
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==Dishevelled PDZ domain homodimer== | ==Dishevelled PDZ domain homodimer== | ||
| - | <StructureSection load='3fy5' size='340' side='right' caption='[[3fy5]], [[Resolution|resolution]] 2.40Å' scene=''> | + | <StructureSection load='3fy5' size='340' side='right'caption='[[3fy5]], [[Resolution|resolution]] 2.40Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3fy5]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3fy5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/African_clawed_frog African clawed frog]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FY5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FY5 FirstGlance]. <br> |
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dsh, dvl2 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dsh, dvl2 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=8355 African clawed frog])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fy5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fy5 OCA], [https://pdbe.org/3fy5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fy5 RCSB], [https://www.ebi.ac.uk/pdbsum/3fy5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fy5 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/DVL2_XENLA DVL2_XENLA]] Involved in at least 2 independent signaling cascades, controlling cell fate via canonical Wnt signaling and cell polarity via a planar cell polarity (PCP) cascade. Acts synergistically with dal/dapple-like to activate Wnt signaling, stabilizing ctnnb1/beta-catenin and leading to dorsal axis formation. Also prevents degradation of ctnnb1/beta-catenin by displacing gsk3 from a complex with ARP/Axin-related protein. Has an additional role in anterior-posterior (A/P) axis formation, specifying different neuroectodermal cell fates along the A/P axis in a dose-dependent manner by activating several early patterning genes. In the PCP pathway, required at the cell membrane for PCP-mediated neural and mesodermal convergent extension during gastrulation and subsequent neural tube closure, acting to activate jnk. Also involved in blastopore closure and archenteron elongation during early, but not late, gastrulation. Associates with ephrin receptors and ligands and acts as part of a downstream PCP pathway to mediate ephrin-mediated cell repulsion via activation of rhoa. Required for efnb1/ephrin-B1-driven movement of non-retinal progenitor cells into the retina during eye field formation. Patterns the hindbrain. Required for ciliogenesis. Controls the docking of basal bodies to the apical plasma membrane; mediates the activation, but not localization of rhoa at the apical surface of ciliated cells during basal body docking. Furthermore, required for the association of basal bodies with membrane-bound vesicles and the vesicle-trafficking protein exoc4/sec8, and this association is in turn required for basal body docking. Once basal bodies are docked, required for the planar polarization of basal bodies that underlies ciliary beating and the directional fluid flow across ciliated epithelia.<ref>PMID:7600981</ref> <ref>PMID:8939601</ref> <ref>PMID:9076682</ref> <ref>PMID:10427095</ref> <ref>PMID:10688669</ref> <ref>PMID:10811222</ref> <ref>PMID:11493574</ref> <ref>PMID:12421719</ref> <ref>PMID:11941372</ref> <ref>PMID:12574121</ref> <ref>PMID:15548584</ref> <ref>PMID:15936275</ref> <ref>PMID:16026968</ref> <ref>PMID:15677333</ref> <ref>PMID:16362052</ref> <ref>PMID:18552847</ref> <ref>PMID:11970895</ref> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</StructureSection> | </StructureSection> | ||
[[Category: African clawed frog]] | [[Category: African clawed frog]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Earnest, T]] | [[Category: Earnest, T]] | ||
[[Category: Friedland, N]] | [[Category: Friedland, N]] | ||
Revision as of 07:50, 9 March 2022
Dishevelled PDZ domain homodimer
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Categories: African clawed frog | Large Structures | Earnest, T | Friedland, N | Hung, L W | Moon, R | Cell membrane | Cell polarity | Cell projection | Cilium | Cilium biogenesis/degradation | Cytoplasm | Cytoplasmic vesicle | Developmental protein | Dishevelled | Gastrulation | Membrane | Nucleus | Pdz | Phosphoprotein | Protein binding | Wnt signaling pathway
