This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3fq6
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==The crystal structure of a methyltransferase domain from Bacteroides thetaiotaomicron VPI== | ==The crystal structure of a methyltransferase domain from Bacteroides thetaiotaomicron VPI== | ||
| - | <StructureSection load='3fq6' size='340' side='right' caption='[[3fq6]], [[Resolution|resolution]] 2.36Å' scene=''> | + | <StructureSection load='3fq6' size='340' side='right'caption='[[3fq6]], [[Resolution|resolution]] 2.36Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3fq6]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3fq6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_thetaiotaomicron"_distaso_1912 "bacillus thetaiotaomicron" distaso 1912]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FQ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FQ6 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Bacteroides thetaiotaomicron, BT_2273 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Bacteroides thetaiotaomicron, BT_2273 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=818 "Bacillus thetaiotaomicron" Distaso 1912])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fq6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fq6 OCA], [https://pdbe.org/3fq6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fq6 RCSB], [https://www.ebi.ac.uk/pdbsum/3fq6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fq6 ProSAT], [https://www.topsan.org/Proteins/MCSG/3fq6 TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/Q8A5G6_BACTN Q8A5G6_BACTN]] Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.[HAMAP-Rule:MF_01877] |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 24: | Line 24: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Bacillus thetaiotaomicron distaso 1912]] | [[Category: Bacillus thetaiotaomicron distaso 1912]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Cobb, G]] | [[Category: Cobb, G]] | ||
[[Category: Joachimiak, A]] | [[Category: Joachimiak, A]] | ||
Current revision
The crystal structure of a methyltransferase domain from Bacteroides thetaiotaomicron VPI
| |||||||||||
