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6mkb

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Current revision (06:33, 11 October 2023) (edit) (undo)
 
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==Crystal structure of murine 4-1BB ligand==
==Crystal structure of murine 4-1BB ligand==
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<StructureSection load='6mkb' size='340' side='right' caption='[[6mkb]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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<StructureSection load='6mkb' size='340' side='right'caption='[[6mkb]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6mkb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MKB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6MKB FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6mkb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MKB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6MKB FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Tnfsf9, Cd137l, Cd157l, Ly63l ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6mkb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mkb OCA], [http://pdbe.org/6mkb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6mkb RCSB], [http://www.ebi.ac.uk/pdbsum/6mkb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6mkb ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6mkb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mkb OCA], [https://pdbe.org/6mkb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6mkb RCSB], [https://www.ebi.ac.uk/pdbsum/6mkb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6mkb ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/TNFL9_MOUSE TNFL9_MOUSE]] Cytokine that binds to TNFRSF9. Induces the proliferation of activated peripheral blood T-cells. May have a role in activation-induced cell death (AICD). May play a role in cognate interactions between T-cells and B-cells/macrophages.
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[https://www.uniprot.org/uniprot/TNFL9_MOUSE TNFL9_MOUSE] Cytokine that binds to TNFRSF9. Induces the proliferation of activated peripheral blood T-cells. May have a role in activation-induced cell death (AICD). May play a role in cognate interactions between T-cells and B-cells/macrophages.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6mkb" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6mkb" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Tumor necrosis factor ligand superfamily 3D structures|Tumor necrosis factor ligand superfamily 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Lk3 transgenic mice]]
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[[Category: Large Structures]]
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[[Category: Bitra, A]]
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[[Category: Mus musculus]]
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[[Category: Doukov, T]]
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[[Category: Bitra A]]
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[[Category: Zajonc, D M]]
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[[Category: Doukov T]]
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[[Category: Dimer]]
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[[Category: Zajonc DM]]
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[[Category: Signaling protein]]
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[[Category: Tnf]]
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Current revision

Crystal structure of murine 4-1BB ligand

PDB ID 6mkb

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