|
|
Line 1: |
Line 1: |
| | | |
| ==Apoenzyme structure of homoglutathione synthetase from Glycine max in open conformation== | | ==Apoenzyme structure of homoglutathione synthetase from Glycine max in open conformation== |
- | <StructureSection load='3kaj' size='340' side='right' caption='[[3kaj]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='3kaj' size='340' side='right'caption='[[3kaj]], [[Resolution|resolution]] 2.00Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[3kaj]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Glycine_hispida Glycine hispida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KAJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KAJ FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[3kaj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KAJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KAJ FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3kak|3kak]], [[3kal|3kal]]</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hGS ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3847 Glycine hispida])</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kaj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kaj OCA], [https://pdbe.org/3kaj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kaj RCSB], [https://www.ebi.ac.uk/pdbsum/3kaj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kaj ProSAT]</span></td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutathione_synthase Glutathione synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.2.3 6.3.2.3] </span></td></tr>
| + | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kaj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kaj OCA], [http://pdbe.org/3kaj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kaj RCSB], [http://www.ebi.ac.uk/pdbsum/3kaj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kaj ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q9M426_SOYBN Q9M426_SOYBN] |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
Line 32: |
Line 32: |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Glutathione synthase]] | + | [[Category: Glycine max]] |
- | [[Category: Glycine hispida]] | + | [[Category: Large Structures]] |
- | [[Category: Arkus, K A.J]] | + | [[Category: Arkus KAJ]] |
- | [[Category: Cahoon, R E]] | + | [[Category: Cahoon RE]] |
- | [[Category: Galant, A]] | + | [[Category: Galant A]] |
- | [[Category: Jez, J M]] | + | [[Category: Jez JM]] |
- | [[Category: Zubieta, C]] | + | [[Category: Zubieta C]] |
- | [[Category: Atp-grasp domain]]
| + | |
- | [[Category: Dimer]]
| + | |
- | [[Category: Ligase]]
| + | |
| Structural highlights
Function
Q9M426_SOYBN
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
The redox active peptide glutathione is ubiquitous in nature, but some plants also synthesize glutathione analogs in response to environmental stresses. To understand the evolution of chemical diversity in the closely related enzymes homoglutathione synthetase (hGS) and glutathione synthetase (GS), we determined the structures of soybean (Glycine max) hGS in three states: apoenzyme, bound to gamma-glutamylcysteine (gammaEC), and with hGSH, ADP, and a sulfate ion bound in the active site. Domain movements and rearrangement of active site loops change the structure from an open active site form (apoenzyme and gammaEC complex) to a closed active site form (hGSH*ADP*SO(4)(2-) complex). The structure of hGS shows that two amino acid differences in an active site loop provide extra space to accommodate the longer beta-Ala moiety of hGSH in comparison to the glycinyl group of glutathione. Mutation of either Leu-487 or Pro-488 to an Ala improves catalytic efficiency using Gly, but a double mutation (L487A/P488A) is required to convert the substrate preference of hGS from beta-Ala to Gly. These structures, combined with site-directed mutagenesis, reveal the molecular changes that define the substrate preference of hGS, explain the product diversity within evolutionarily related GS-like enzymes, and reinforce the critical role of active site loops in the adaptation and diversification of enzyme function.
Structural basis for evolution of product diversity in soybean glutathione biosynthesis.,Galant A, Arkus KA, Zubieta C, Cahoon RE, Jez JM Plant Cell. 2009 Nov;21(11):3450-8. Epub 2009 Nov 30. PMID:19948790[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Galant A, Arkus KA, Zubieta C, Cahoon RE, Jez JM. Structural basis for evolution of product diversity in soybean glutathione biosynthesis. Plant Cell. 2009 Nov;21(11):3450-8. Epub 2009 Nov 30. PMID:19948790 doi:10.1105/tpc.109.071183
|