3kbr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:00, 9 October 2024) (edit) (undo)
 
Line 1: Line 1:
==The crystal structure of cyclohexadienyl dehydratase precursor from Pseudomonas aeruginosa PA01==
==The crystal structure of cyclohexadienyl dehydratase precursor from Pseudomonas aeruginosa PA01==
-
<StructureSection load='3kbr' size='340' side='right' caption='[[3kbr]], [[Resolution|resolution]] 1.66&Aring;' scene=''>
+
<StructureSection load='3kbr' size='340' side='right'caption='[[3kbr]], [[Resolution|resolution]] 1.66&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3kbr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KBR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KBR FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3kbr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KBR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KBR FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.659&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PA3475, pheC, Pseudomonas aeruginosa ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kbr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kbr OCA], [https://pdbe.org/3kbr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kbr RCSB], [https://www.ebi.ac.uk/pdbsum/3kbr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kbr ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kbr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kbr OCA], [http://pdbe.org/3kbr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kbr RCSB], [http://www.ebi.ac.uk/pdbsum/3kbr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kbr ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PHEC_PSEAE PHEC_PSEAE]] Forms alternative pathway for phenylalanine biosynthesis. Can catalyze two reactions: prephenate dehydratase and arogenate dehydratase. May have a role in chemotaxis or transport.
+
[https://www.uniprot.org/uniprot/PHEC_PSEAE PHEC_PSEAE] Forms alternative pathway for phenylalanine biosynthesis. Can catalyze two reactions: prephenate dehydratase and arogenate dehydratase. May have a role in chemotaxis or transport.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 16: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kb/3kbr_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kb/3kbr_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 23: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Buck, K]]
+
[[Category: Large Structures]]
-
[[Category: Joachimiak, A]]
+
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Structural genomic]]
+
[[Category: Buck K]]
-
[[Category: Marshall, N]]
+
[[Category: Joachimiak A]]
-
[[Category: Tan, K]]
+
[[Category: Marshall N]]
-
[[Category: Amino-acid biosynthesis]]
+
[[Category: Tan K]]
-
[[Category: Aromatic amino acid biosynthesis]]
+
-
[[Category: Cyclohexadienyl dehydratase precursor]]
+
-
[[Category: Lyase]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Multifunctional enzyme]]
+
-
[[Category: Phenylalanine biosynthesis]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Pseudomonas aeruginosa pa01]]
+

Current revision

The crystal structure of cyclohexadienyl dehydratase precursor from Pseudomonas aeruginosa PA01

PDB ID 3kbr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools