3kb5

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Current revision (08:29, 20 March 2024) (edit) (undo)
 
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==PRY-SPRY domain of human TRIM72==
==PRY-SPRY domain of human TRIM72==
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<StructureSection load='3kb5' size='340' side='right' caption='[[3kb5]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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<StructureSection load='3kb5' size='340' side='right'caption='[[3kb5]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3kb5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KB5 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3kb5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KB5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KB5 FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PRY-SPRY ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kb5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kb5 OCA], [http://pdbe.org/3kb5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kb5 RCSB], [http://www.ebi.ac.uk/pdbsum/3kb5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kb5 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kb5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kb5 OCA], [https://pdbe.org/3kb5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kb5 RCSB], [https://www.ebi.ac.uk/pdbsum/3kb5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kb5 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/TRI72_HUMAN TRI72_HUMAN]] Muscle-specific protein that plays a central role in cell membrane repair by nucleating the assembly of the repair machinery at injury sites. Specifically binds phosphatidylserine. Acts as a sensor of oxidation: upon membrane damage, entry of extracellular oxidative environment results in disulfide bond formation and homooligomerization at the injury site. This oligomerization acts as a nucleation site for recruitment of TRIM72-containing vesicles to the injury site, leading to membrane patch formation. Probably acts upstream of the Ca(2+)-dependent membrane resealing process. Required for transport of DYSF to sites of cell injury during repair patch formation. Regulates membrane budding and exocytosis. May be involved in the regulation of the mobility of KCNB1-containing endocytic vesicles (By similarity).
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[https://www.uniprot.org/uniprot/TRI72_HUMAN TRI72_HUMAN] Muscle-specific protein that plays a central role in cell membrane repair by nucleating the assembly of the repair machinery at injury sites. Specifically binds phosphatidylserine. Acts as a sensor of oxidation: upon membrane damage, entry of extracellular oxidative environment results in disulfide bond formation and homooligomerization at the injury site. This oligomerization acts as a nucleation site for recruitment of TRIM72-containing vesicles to the injury site, leading to membrane patch formation. Probably acts upstream of the Ca(2+)-dependent membrane resealing process. Required for transport of DYSF to sites of cell injury during repair patch formation. Regulates membrane budding and exocytosis. May be involved in the regulation of the mobility of KCNB1-containing endocytic vesicles (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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==See Also==
==See Also==
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*[[Ubiquitin protein ligase|Ubiquitin protein ligase]]
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*[[Ubiquitin protein ligase 3D structures|Ubiquitin protein ligase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
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[[Category: Jeong, B C]]
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[[Category: Large Structures]]
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[[Category: Kwon, O B]]
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[[Category: Jeong B-C]]
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[[Category: Park, E Y]]
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[[Category: Kwon O-B]]
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[[Category: Song, H K]]
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[[Category: Park EY]]
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[[Category: B30 2]]
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[[Category: Song HK]]
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[[Category: Gustavus]]
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[[Category: High resolution]]
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[[Category: Membrane protein]]
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[[Category: Mg53]]
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[[Category: Pry]]
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[[Category: Spry]]
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[[Category: Trim21]]
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[[Category: Trim72]]
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[[Category: Tripartite motif]]
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Current revision

PRY-SPRY domain of human TRIM72

PDB ID 3kb5

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