3kv1

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Current revision (06:25, 27 November 2024) (edit) (undo)
 
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==Crystal Structure of Putative Sugar-Binding Domain of Transcriptional Repressor from Vibrio fischeri==
==Crystal Structure of Putative Sugar-Binding Domain of Transcriptional Repressor from Vibrio fischeri==
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<StructureSection load='3kv1' size='340' side='right' caption='[[3kv1]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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<StructureSection load='3kv1' size='340' side='right'caption='[[3kv1]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3kv1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Alif1 Alif1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KV1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KV1 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3kv1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aliivibrio_fischeri_ES114 Aliivibrio fischeri ES114]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KV1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KV1 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lsrR, VF_A0400 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=312309 ALIF1])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kv1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kv1 OCA], [https://pdbe.org/3kv1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kv1 RCSB], [https://www.ebi.ac.uk/pdbsum/3kv1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kv1 ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein-N(pi)-phosphohistidine--sugar_phosphotransferase Protein-N(pi)-phosphohistidine--sugar phosphotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.69 2.7.1.69] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kv1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kv1 OCA], [http://pdbe.org/3kv1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kv1 RCSB], [http://www.ebi.ac.uk/pdbsum/3kv1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kv1 ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q5E0H6_ALIF1 Q5E0H6_ALIF1]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kv/3kv1_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kv/3kv1_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Alif1]]
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[[Category: Aliivibrio fischeri ES114]]
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[[Category: Bearden, J]]
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[[Category: Large Structures]]
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[[Category: Joachimiak, A]]
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[[Category: Bearden J]]
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[[Category: Kim, Y]]
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[[Category: Joachimiak A]]
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[[Category: Structural genomic]]
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[[Category: Kim Y]]
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[[Category: Marshall, N]]
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[[Category: Marshall N]]
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[[Category: Alpha-beta structure]]
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[[Category: Mcsg]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Transcription]]
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Current revision

Crystal Structure of Putative Sugar-Binding Domain of Transcriptional Repressor from Vibrio fischeri

PDB ID 3kv1

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