3rsp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:3rsp.jpg|left|200px]]
[[Image:3rsp.jpg|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 3rsp |SIZE=350|CAPTION= <scene name='initialview01'>3rsp</scene>, resolution 1.7&Aring;
+
The line below this paragraph, containing "STRUCTURE_3rsp", creates the "Structure Box" on the page.
-
|SITE= <scene name='pdbsite=B1:Pyrimidine+Binding+Site+On+5&#39;+Side+Of+Scissile+Phosphate'>B1</scene>, <scene name='pdbsite=B2:Purine+Binding+Site+On+3&#39;+Side+Of+Scissile+Phosphate'>B2</scene>, <scene name='pdbsite=P1:Catalyzes+Cleavage+Of+P-O5&#39;+Bond+Of+A+Phosphoryl+Group+I+...'>P1</scene> and <scene name='pdbsite=P2:Phosphate+Binding+Site'>P2</scene>
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Pancreatic_ribonuclease Pancreatic ribonuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.27.5 3.1.27.5] </span>
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_3rsp| PDB=3rsp | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3rsp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rsp OCA], [http://www.ebi.ac.uk/pdbsum/3rsp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3rsp RCSB]</span>
+
-
}}
+
'''STRUCTURE OF THE P93G VARIANT OF RIBONUCLEASE A'''
'''STRUCTURE OF THE P93G VARIANT OF RIBONUCLEASE A'''
Line 30: Line 27:
[[Category: Raines, R T.]]
[[Category: Raines, R T.]]
[[Category: Schultz, L W.]]
[[Category: Schultz, L W.]]
-
[[Category: endonuclease]]
+
[[Category: Endonuclease]]
-
[[Category: hydrolase]]
+
[[Category: Hydrolase]]
-
[[Category: ribonuclease some]]
+
[[Category: Ribonuclease some]]
-
[[Category: site-directed mutagenesis]]
+
[[Category: Site-directed mutagenesis]]
-
[[Category: x-ray diffraction]]
+
[[Category: X-ray diffraction]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 22:12:32 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:36:04 2008''
+

Revision as of 19:12, 4 May 2008

Template:STRUCTURE 3rsp

STRUCTURE OF THE P93G VARIANT OF RIBONUCLEASE A


Overview

The peptide bonds preceding Pro 93 and Pro 114 of bovine pancreatic ribonuclease A (RNase A) are in the cis conformation. The trans-to-cis isomerization of these bonds had been indicted as the slow step during protein folding. Here, site-directed mutagenesis was used to replace Pro 93 or Pro 114 with a glycine residue, and the crystalline structure of the P93G variant was determined by X-ray diffraction analysis to a resolution of 1.7 A. This structure is essentially identical to that of the wild-type protein, except for the 91-94 beta-turn containing the substitution. In the wild-type protein, the beta-turn is of type VIa. In the P93G variant, this turn is of type II with the peptide bond preceding Gly 93 being trans. The thermal stabilities of the P93G and P114G variants were assessed by differential scanning calorimetry and thermal denaturation experiments monitored by ultraviolet spectroscopy. The value of delta deltaGm which reports on the stability lost in the variants, is 1.5-fold greater for the P114G variant than for the P93G variant. The greater stability of the P93G variant is likely due to the relatively facile accommodation of residues 91-94 in a type II turn, which has a preference for a glycine residue in its i + 2 position.

About this Structure

3RSP is a Single protein structure of sequence from Bos taurus. Full crystallographic information is available from OCA.

Reference

Structure and stability of the P93G variant of ribonuclease A., Schultz LW, Hargraves SR, Klink TA, Raines RT, Protein Sci. 1998 Jul;7(7):1620-5. PMID:9684895 Page seeded by OCA on Sun May 4 22:12:32 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools