6huy
From Proteopedia
(Difference between revisions)
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==HmdII from Desulfurobacterium thermolithotrophum reconstitued with Fe-guanylylpyridinol (FeGP) cofactor and co-crystallized with methenyl-tetrahydrofolate form A== | ==HmdII from Desulfurobacterium thermolithotrophum reconstitued with Fe-guanylylpyridinol (FeGP) cofactor and co-crystallized with methenyl-tetrahydrofolate form A== | ||
| - | <StructureSection load='6huy' size='340' side='right' caption='[[6huy]], [[Resolution|resolution]] 2.25Å' scene=''> | + | <StructureSection load='6huy' size='340' side='right'caption='[[6huy]], [[Resolution|resolution]] 2.25Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6huy]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HUY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HUY FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6huy]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Destd Destd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HUY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HUY FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=FE9:IRON-GUANYLYL+PYRIDINOL+COFACTOR'>FE9</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GUE:5,10-Methenyltetrahydrofolate'>GUE</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=FE9:IRON-GUANYLYL+PYRIDINOL+COFACTOR'>FE9</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GUE:5,10-Methenyltetrahydrofolate'>GUE</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr> | ||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Dester_1504 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=868864 DESTD])</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5,10-methenyltetrahydromethanopterin_hydrogenase 5,10-methenyltetrahydromethanopterin hydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.12.98.2 1.12.98.2] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5,10-methenyltetrahydromethanopterin_hydrogenase 5,10-methenyltetrahydromethanopterin hydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.12.98.2 1.12.98.2] </span></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6huy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6huy OCA], [http://pdbe.org/6huy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6huy RCSB], [http://www.ebi.ac.uk/pdbsum/6huy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6huy ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6huy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6huy OCA], [http://pdbe.org/6huy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6huy RCSB], [http://www.ebi.ac.uk/pdbsum/6huy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6huy ProSAT]</span></td></tr> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: 5,10-methenyltetrahydromethanopterin hydrogenase]] | [[Category: 5,10-methenyltetrahydromethanopterin hydrogenase]] | ||
| + | [[Category: Destd]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Ataka, K]] | [[Category: Ataka, K]] | ||
[[Category: Ermler, U]] | [[Category: Ermler, U]] | ||
Revision as of 12:42, 13 March 2019
HmdII from Desulfurobacterium thermolithotrophum reconstitued with Fe-guanylylpyridinol (FeGP) cofactor and co-crystallized with methenyl-tetrahydrofolate form A
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Categories: 5,10-methenyltetrahydromethanopterin hydrogenase | Destd | Large Structures | Ataka, K | Ermler, U | Huang, G | Kahnt, J | Shima, S | Wagner, T | Watanabe, T | Cofactor biosynthesis | H2-activation | Hydrogenase | Lateral gene-transfer | Metalloenzyme | Oxidoreductase | Paralog | Sulfur-reducing bacteria | Tetrahydrofolate | Tetrahydromethanopterin
