This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
6fed
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Structure of Mycobacterium smegmatis RNA polymerase Sigma-A holoenzyme== | ==Structure of Mycobacterium smegmatis RNA polymerase Sigma-A holoenzyme== | ||
| - | <StructureSection load='6fed' size='340' side='right' caption='[[6fed]], [[Resolution|resolution]] 3.80Å' scene=''> | + | <StructureSection load='6fed' size='340' side='right'caption='[[6fed]], [[Resolution|resolution]] 3.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6fed]] is a 5 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FED OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6FED FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6fed]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycs2 Mycs2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FED OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6FED FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rpoA, MSMEG_1524, MSMEI_1488 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=246196 MYCS2]), rpoB, MSMEG_1367, MSMEI_1328 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=246196 MYCS2]), rpoC, MSMEG_1368, MSMEI_1329 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=246196 MYCS2]), rpoZ, MSMEG_3053, MSMEI_2977 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=246196 MYCS2])</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_RNA_polymerase DNA-directed RNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.6 2.7.7.6] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_RNA_polymerase DNA-directed RNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.6 2.7.7.6] </span></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6fed FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fed OCA], [http://pdbe.org/6fed PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6fed RCSB], [http://www.ebi.ac.uk/pdbsum/6fed PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6fed ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6fed FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fed OCA], [http://pdbe.org/6fed PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6fed RCSB], [http://www.ebi.ac.uk/pdbsum/6fed PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6fed ProSAT]</span></td></tr> | ||
| Line 15: | Line 16: | ||
</StructureSection> | </StructureSection> | ||
[[Category: DNA-directed RNA polymerase]] | [[Category: DNA-directed RNA polymerase]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Mycs2]] | ||
[[Category: Barvik, I]] | [[Category: Barvik, I]] | ||
[[Category: Kouba, T]] | [[Category: Kouba, T]] | ||
Revision as of 06:46, 31 July 2019
Structure of Mycobacterium smegmatis RNA polymerase Sigma-A holoenzyme
| |||||||||||
