This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6i8n

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:49, 24 January 2024) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of LmrR with V15 replaced by unnatural amino acid 4-amino-L-phenylalanine==
==Crystal structure of LmrR with V15 replaced by unnatural amino acid 4-amino-L-phenylalanine==
-
<StructureSection load='6i8n' size='340' side='right' caption='[[6i8n]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
+
<StructureSection load='6i8n' size='340' side='right'caption='[[6i8n]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6i8n]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Laclm Laclm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6I8N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6I8N FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6i8n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_lactis_subsp._cremoris_MG1363 Lactococcus lactis subsp. cremoris MG1363]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6I8N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6I8N FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPO:3[N-MORPHOLINO]PROPANE+SULFONIC+ACID'>MPO</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.79&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=HOX:4-AMINO-L-PHENYLALANINE'>HOX</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HOX:4-AMINO-L-PHENYLALANINE'>HOX</scene>, <scene name='pdbligand=MPO:3[N-MORPHOLINO]PROPANE+SULFONIC+ACID'>MPO</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">llmg_0323 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=416870 LACLM])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6i8n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6i8n OCA], [https://pdbe.org/6i8n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6i8n RCSB], [https://www.ebi.ac.uk/pdbsum/6i8n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6i8n ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6i8n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6i8n OCA], [http://pdbe.org/6i8n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6i8n RCSB], [http://www.ebi.ac.uk/pdbsum/6i8n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6i8n ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A2RI36_LACLM A2RI36_LACLM]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 6i8n" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6i8n" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Laclm]]
+
[[Category: Lactococcus lactis subsp. cremoris MG1363]]
-
[[Category: Reddem, R]]
+
[[Category: Large Structures]]
-
[[Category: Thunnissen, A M.W H]]
+
[[Category: Reddem R]]
-
[[Category: Artificial enzyme]]
+
[[Category: Thunnissen AMWH]]
-
[[Category: Dna binding protein]]
+
-
[[Category: Engineered variant]]
+
-
[[Category: Padr family]]
+
-
[[Category: Transcriptional regulator]]
+
-
[[Category: Unnatural amino acid]]
+

Current revision

Crystal structure of LmrR with V15 replaced by unnatural amino acid 4-amino-L-phenylalanine

PDB ID 6i8n

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools