This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6fi9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:28, 9 May 2024) (edit) (undo)
 
Line 1: Line 1:
==Crystal Structure of a zinc-responsive MarR family member, Lactococcus lactis ZitR==
==Crystal Structure of a zinc-responsive MarR family member, Lactococcus lactis ZitR==
-
<StructureSection load='6fi9' size='340' side='right' caption='[[6fi9]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
+
<StructureSection load='6fi9' size='340' side='right'caption='[[6fi9]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6fi9]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FI9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6FI9 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6fi9]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_lactis_subsp._cremoris_MG1363 Lactococcus lactis subsp. cremoris MG1363]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FI9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6FI9 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6fi9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fi9 OCA], [http://pdbe.org/6fi9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6fi9 RCSB], [http://www.ebi.ac.uk/pdbsum/6fi9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6fi9 ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6fi9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fi9 OCA], [https://pdbe.org/6fi9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6fi9 RCSB], [https://www.ebi.ac.uk/pdbsum/6fi9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6fi9 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/ZITR_LACLM ZITR_LACLM]] Zinc-responsive regulator that represses expression of the zit operon in the presence of zinc. Acts by binding two palindromic operator sites overlapping the -35 and -10 boxes of the zit promoter. Could be a sensitive sensor of intracellular zinc to efficiently respond to zinc variations in the environment.<ref>PMID:21317326</ref>
+
[https://www.uniprot.org/uniprot/ZITR_LACLM ZITR_LACLM] Zinc-responsive regulator that represses expression of the zit operon in the presence of zinc. Acts by binding two palindromic operator sites overlapping the -35 and -10 boxes of the zit promoter. Could be a sensitive sensor of intracellular zinc to efficiently respond to zinc variations in the environment.<ref>PMID:21317326</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 6fi9" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6fi9" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Legrand, P]]
+
[[Category: Lactococcus lactis subsp. cremoris MG1363]]
-
[[Category: Varela, P F]]
+
[[Category: Large Structures]]
-
[[Category: Adhesin competence regulator]]
+
[[Category: Legrand P]]
-
[[Category: Gene regulation]]
+
[[Category: Varela PF]]
-
[[Category: Multiple antibiotic resistance regulator]]
+
-
[[Category: Winged helix-turn-helix dna binding domain]]
+
-
[[Category: Zinc responsive repressor]]
+
-
[[Category: Zinc transport regulator]]
+

Current revision

Crystal Structure of a zinc-responsive MarR family member, Lactococcus lactis ZitR

PDB ID 6fi9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/6fi9"
Personal tools