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3wrg
From Proteopedia
(Difference between revisions)
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==The complex structure of HypBA1 with L-arabinose== | ==The complex structure of HypBA1 with L-arabinose== | ||
| - | <StructureSection load='3wrg' size='340' side='right' caption='[[3wrg]], [[Resolution|resolution]] 2.23Å' scene=''> | + | <StructureSection load='3wrg' size='340' side='right'caption='[[3wrg]], [[Resolution|resolution]] 2.23Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3wrg]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3wrg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bifl2 Bifl2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WRG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WRG FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FUB:BETA-L-ARABINOFURANOSE'>FUB</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FUB:BETA-L-ARABINOFURANOSE'>FUB</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3wre|3wre]], [[3wrf|3wrf]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3wre|3wre]], [[3wrf|3wrf]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hypBA1 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hypBA1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=565042 BIFL2])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Non-reducing_end_beta-L-arabinofuranosidase Non-reducing end beta-L-arabinofuranosidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.185 3.2.1.185] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wrg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wrg OCA], [https://pdbe.org/3wrg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wrg RCSB], [https://www.ebi.ac.uk/pdbsum/3wrg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wrg ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/HYBA1_BIFL2 HYBA1_BIFL2]] Beta-L-arabinofuranosidase that removes the beta-L-arabinofuranose residue from the non-reducing end of various substrates, including beta-L-arabinofuranosyl-hydroxyproline (Ara-Hyp), Ara-beta-1,2-Ara-beta-Hyp (Ara(2)-Hyp), Ara-beta-1,2-Ara-beta-1,2-Ara-beta-Hyp (Ara(3)-Hyp), and beta-L-arabinofuranosyl-(1->2)-1-O-methyl-beta-L-arabinofuranose. In the presence of 1-alkanols, shows transglycosylation activity, retaining the anomeric configuration of the arabinofuranose residue. |
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Bifl2]] | [[Category: Bifl2]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Non-reducing end beta-L-arabinofuranosidase]] | [[Category: Non-reducing end beta-L-arabinofuranosidase]] | ||
[[Category: Chan, H C]] | [[Category: Chan, H C]] | ||
Revision as of 05:47, 3 August 2022
The complex structure of HypBA1 with L-arabinose
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Categories: Bifl2 | Large Structures | Non-reducing end beta-L-arabinofuranosidase | Chan, H C | Chen, C C | Cheng, Y S | Guo, R T | Ho, M R | Hsu, S T | Huang, C H | Huang, Y N | Ko, T P | Liu, J R | Wang, I | Zeng, Y F | Zhu, Z | Arabinofuranose | Beta-l-arabinofuranosidase | Glycoside hydrolase | Hydrolase | Two b-jellyroll fold
